CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78206	Canola	cytosol	80.78	98.94
Bra007044.1-P	Field mustard	cytosol	80.56	98.68
AT3G54090.1	Thale cress	plastid	88.98	87.47
PGSC0003DMT400052461	Potato	cytosol	67.82	80.93
KRH65986	Soybean	nucleus	66.09	69.55
KRH75791	Soybean	nucleus	69.98	69.38
Solyc09g011850.2.1	Tomato	nucleus	70.63	68.41
GSMUA_Achr10P...	Banana	plastid	66.09	57.95
TraesCS3A01G365700.1	Wheat	plastid	61.56	54.6
Zm00001d042847_P001	Maize	plastid	61.34	54.51
Os01t0851000-01	Rice	plastid	61.99	54.05
TraesCS3D01G358800.1	Wheat	plastid	61.34	53.99
TraesCS3B01G397500.1	Wheat	plastid	60.91	53.82
OQU87871	Sorghum	plastid	60.69	53.63
VIT_08s0007g01640.t01	Wine grape	cytosol	67.82	43.61
CDY06000	Canola	cytosol	26.57	37.73
CDX67798	Canola	cytosol	26.13	37.12
CDY00619	Canola	cytosol	26.13	37.12
CDX98377	Canola	cytosol	25.92	36.81
CDX89022	Canola	cytosol	25.92	36.81
CDX71907	Canola	cytosol	25.92	36.81
CDX84788	Canola	cytosol	25.27	36.0
CDY56614	Canola	cytosol	25.27	36.0
CDY23944	Canola	cytosol	25.27	36.0
CDY10801	Canola	cytosol	25.27	36.0
CDY05089	Canola	cytosol	24.84	35.6
CDX90749	Canola	cytosol	24.84	35.6
CDY00501	Canola	cytosol	26.35	35.57
CDY38879	Canola	cytosol	26.13	35.28
CDY51025	Canola	cytosol	26.13	35.28
CDY15383	Canola	cytosol	24.62	34.97
CDX86540	Canola	cytosol	25.7	34.49
CDY54150	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.77	34.11
CDY19092	Canola	plastid, vacuole	24.62	33.73
CDY32617	Canola	cytosol	25.92	33.71
CDX96146	Canola	plastid	27.0	32.13
CDY55675	Canola	plastid	26.78	31.96
CDY15557	Canola	cytosol	11.23	31.71
CDY10167	Canola	endoplasmic reticulum, golgi	25.05	31.61
CDY47709	Canola	endoplasmic reticulum, golgi	22.46	30.77
CDY05997	Canola	cytosol, mitochondrion	8.64	29.85
CDY09993	Canola	cytosol	6.7	29.81
CDX95956	Canola	plastid	38.88	29.61
CDX71905	Canola	mitochondrion	5.83	29.35
CDY40900	Canola	plastid	38.88	29.22
CDY00632	Canola	cytosol	11.02	20.73
CDY65484	Canola	cytosol	10.37	19.67

Protein Annotations

MapMan:15.6.1.2.2.6	Gene3D:3.40.1190.20	GO:A0A078C9M6	EnsemblPlants:CDX73510	ProteinID:CDX73510	ProteinID:CDX73510.1
InterPro:Carboh/pur_kinase_PfkB_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740	GO:GO:0016773	EnsemblPlantsGene:GSBRNA2T00109026001
InterPro:IPR029056	PFAM:PF00294	ScanProsite:PS00583	PANTHER:PTHR43085	PANTHER:PTHR43085:SF10	InterPro:PfkB_dom
InterPro:Ribokinase-like	SUPFAM:SSF53613	UniParc:UPI0004EDFF09	SEG:seg	:	:

Description

BnaC08g24930D

Coordinates

chrLK031799:-:798209..799778

Molecular Weight (calculated)

52675.6 Da

IEP (calculated)

6.334

GRAVY (calculated)

-0.481

Length

463 amino acids

Sequence
(BLAST)

001: MASLHLFPHL HHFDSTIHRR EIVAHSRRQF QSTKASINGG ITNGAAAAET AKPSRKGKSK KKQTSTVTIE TNPDSDPALV DYDDGMDFPY DDPPLVCCFG
101: AVQKEFVPVV RVHDNPMHPD IYSQWKMLQW DPPEFGRAPG GPPSNVAISH VRLGGRAAFI GKVGEDDYGE ELVLMMNKER VQTRAVKFDE GSSTACTRVK
201: IKFEDGKMKA ETVKEPPEDS LLASELNLAV LKEARIFHFN SEVLTSPTMQ STLFKAIQWS KKFGGLIFFD LNLPLPLWRS RNETRKLIKK AWDEANIIEA
301: SQQELEFLLD EEYYERRRNY TPQYFAEDFE QTKNRRDYYH YTPEEIKPLW HDNLKLLVVT DGTLRLHYYT PKFDGVVVGT EDVLITPFTC DRTGSGDAVV
401: AGIMRKLTTC PEMFEDQDVL ERQLRFAVAA GIISQWTIGA VRGFPTESAT QNLKEQVYVP SMW

Best Arabidopsis Sequence Match ( AT3G54090.1 )
(BLAST)

001: MASLLIFPHL HHFDSSLDRR EVLVVRHSQA SRRFLTPKAS INGSGITNGA AAETTSKPSR KGRKKKQTST VIEKDNTETD PELNPELADY DDGIEFPYDD
101: PPLVCCFGAV QKEFVPVVRV HDNPMHPDMY SQWKMLQWDP PEFGRAPGGP PSNVAISHVR LGGRAAFMGK VGEDDFGDEL VLMMNQERVQ TRAVKFDENS
201: KTACTRVKIK FKDGKMMAET VKEPPEDSLF ASELNLAVLK EARIFHFNSE VLTSPTMQST LFTAIQWSKK FGGLIFFDLN LPLPLWRSRN ETRKLIKKAW
301: NEANIIEVSQ QELEFLLDED YYERRRNYTP QYFAEDFDQT KNRRDYYHYT PEEIKSLWHD KLKLLVVTDG TLRLHYYTPT FDGVVIGTED VLITPFTCDR
401: TGSGDAVVAG IMRKLTTCPE MFEDQDVMER QLRFAVAAGI IAQWTIGAVR GFPTESATQN LKEQVYVPSM W

Arabidopsis Description

FLN1Fructokinase-like 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M394]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.