Factsheet for Os09t0332700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0333600-01	Rice	cytosol, plasma membrane	72.75	82.23
PGSC0003DMT400034141	Potato	mitochondrion	11.95	64.77
Bra012798.1-P	Field mustard	cytosol	7.97	40.43
Os01t0724400-00	Rice	cytosol	11.74	32.18
VIT_09s0002g03580.t01	Wine grape	plasma membrane	39.83	27.54
EES04730	Sorghum	mitochondrion	57.65	19.1
KRH03783	Soybean	cytosol, nucleus, plasma membrane	47.8	16.08
KRH56668	Soybean	cytosol, nucleus, plasma membrane	47.59	16.01
PGSC0003DMT400090739	Potato	plasma membrane	32.08	13.36
HORVU6Hr1G019080.3	Barley	plasma membrane	20.55	10.71
Solyc02g055540.1.1	Tomato	endoplasmic reticulum, mitochondrion, nucleus, vacuole	2.94	6.42
Os02t0208300-01	Rice	plasma membrane	1.26	3.28
Os09t0333500-01	Rice	cytosol, plasma membrane	1.05	1.48
Os02t0318450-00	Rice	plasma membrane	0.84	1.17
PGSC0003DMT400049311	Potato	cytosol, peroxisome, vacuole	0.63	0.99
PGSC0003DMT400018880	Potato	plasma membrane	0.63	0.8
Os10t0205500-01	Rice	cytosol, mitochondrion, peroxisome	0.42	0.66
PGSC0003DMT400049314	Potato	cytosol	0.0	0.0

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A0P0XK88	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABC_trans_N
InterPro:ABC_transporter-like	ProteinID:BAT07533.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
InterPro:IPR003439	EnsemblPlantsGene:Os09g0332700	EnsemblPlants:Os09t0332700-01	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF14510
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF306	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0001B671AD
SEG:seg	:	:	:	:	:

Description

OsPDR20Similar to PDR-type ABC transporter 2 (Fragment). (Os09t0332700-01);Hypothetical conserved gene. (Os09t0332700-02)

Coordinates

chr9:-:9970574..9979350

Molecular Weight (calculated)

52785.3 Da

IEP (calculated)

6.308

GRAVY (calculated)

-0.213

Length

477 amino acids

Sequence
(BLAST)

001: MDDAGEIHAL GGSLRREASS ARSGDAAVFF SRSSSRDEDD EEALRWAALE KLPTYDRART AVLAMPEGEL REVNVQRLGP QERHALLQRL AWVGDDHARF
101: LSKFKDRVDR VGIELPTIEV RYENLNVEAE AYVGSRGLPT ILNTYANVLE GLANTLHITP NRKQKISILH NVSGIIKPHR MTLLLGPPGA GKTTLLLALA
201: GNVPSGLKVS GQITYNGHTM DEFEPRRSAA YVSQHDLHMG ELTVRETVNF SAKCQGIGHR YDLLMELSRR EKEENIKPDP EVDIYLKAAA TGEQKAEVVT
301: NHILKVLGLD ICADTIVGNN MLRGISGGQK KRVTTAEMIV TPGRALFMDE ISTGLDSSTT YNIVDSIRQT IHIVGGTAVI ALLQPAPETY ELFDDIILLS
401: DGQVVYNGPR EHVLEFFESV GFKCPERKGC RILLPFSQLC LLNALCSTGN EQLTCIHLCH TPWDRLQLNF HTSLFSP

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.