Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 1
- plastid 1
- mitochondrion 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400018880 | Potato | plasma membrane | 40.92 | 32.98 |
| PGSC0003DMT400050157 | Potato | plasma membrane | 17.49 | 24.2 |
| PGSC0003DMT400034124 | Potato | plastid | 86.8 | 18.43 |
| KRH56668 | Soybean | cytosol, nucleus, plasma membrane | 59.08 | 12.62 |
| KRH03783 | Soybean | cytosol, nucleus, plasma membrane | 58.75 | 12.55 |
| PGSC0003DMT400092002 | Potato | cytosol | 6.6 | 11.7 |
| PGSC0003DMT400090739 | Potato | plasma membrane | 38.28 | 10.13 |
| PGSC0003DMT400049314 | Potato | cytosol | 1.32 | 2.35 |
| PGSC0003DMT400048849 | Potato | extracellular, plasma membrane, plastid | 0.33 | 0.88 |
| Os09t0332700-01 | Rice | cytosol | 0.99 | 0.63 |
| PGSC0003DMT400034141 | Potato | mitochondrion | 0.0 | 0.0 |
| PGSC0003DMT400074382 | Potato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400049311 | EnsemblPlantsGene:PGSC0003DMG400019165 | Gene3D:3.40.50.300 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:ABC_2_trans | InterPro:P-loop_NTPase | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF437 | PFAM:PF01061 | PGSC:PGSC0003DMG400019165 |
| SEG:seg | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0002956ECD | UniProt:M1BNJ7 | MapMan:24.1.3.2.2 |
Description
PDR-type ABC transporter 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400019165]
Coordinates
chr5:-:48918234..48921168
Molecular Weight (calculated)
33888.9 Da
IEP (calculated)
7.793
GRAVY (calculated)
0.152
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEPTSGLDA RAAAIVMRAV RNTVDTGRTV VCTIHQPSID IFEAFDELFL MKRGGQEIYV GPLGRSSCHL IKYFESLPGV SKIKEAYNPA TWMLEVTAAS
101: QEMMLGVDFA DLYKKSDLYK RNKALIAELS TPRPGTKDLH FETQFSQSFW TQCMACLWKQ HLSYWRNPSY TAVRFIFTVI LALVFGTLFW DLGRRVSQSQ
201: DLFNAMGSMY AATLFLGVQN SSSVQPVVAV ERTVFYRERA AGMYSALPYA FGQVIVEIPY VFVQAAFYGI IVYAMIGFEW TVAKSFGTSS SCTSLSCTSP
301: SMA
101: QEMMLGVDFA DLYKKSDLYK RNKALIAELS TPRPGTKDLH FETQFSQSFW TQCMACLWKQ HLSYWRNPSY TAVRFIFTVI LALVFGTLFW DLGRRVSQSQ
201: DLFNAMGSMY AATLFLGVQN SSSVQPVVAV ERTVFYRERA AGMYSALPYA FGQVIVEIPY VFVQAAFYGI IVYAMIGFEW TVAKSFGTSS SCTSLSCTSP
301: SMA
0001: MDYDPAHAMS RGGSMRQTIS RSVSKASRNM EDIFNTSSRR TKSVNEDEEA LKWASIEKLP TYNRLRTSLM PELGEDDVYG NQILNKAVDV TKLDGEERQK
0101: FIDMVFKVAE QDNERILTKL RNRIDRVGIQ LPTVEVRYDH LTVKADCYTG DRSLPSLLNA VRNMGEAALG MIGIRLAKKA QLTILKDVSG IVKPSRMTLL
0201: LGPPSSGKTT LLLALAGKLD KSLDVSGEVT YNGYRLNEFV PIKTSAYISQ NDLHVGIMTV KETLDFSARC QGVGTRYDLL NELARREKDA GIFPEADVDL
0301: FMKASAAQGV KSSLITDYTL KILGLDICKD TIVGDDMMRG ISGGQKKRVT TGEMIVGPTK TLFMDEISTG LDSSTTFQIV KCLQQIVHLT EATVLISLLQ
0401: PAPETFDLFD DIILLSEGQI VYQGPRDHIL EFFESFGFKC PERKGTADFL QEVTSKKDQE QYWVDPNRPY RYIPVSEFAS SFKKFHVGSK LSNELSVPYD
0501: KSKSHKAALM FDKYSIKKTE LLKSCWDKEW MLMKRNSFFY VFKTVQIIII AAITSTLYLR TEMHTRNEID ANIYVGSLLF AMIVNMFNGL AEMAMTIQRL
0601: PVFYKQRDLL FHPPWTYTLP TFLLGIPISI FESTAWMVVT YYSIGYAPDA ERFFKQFLII FLIQQMAAGI FRFIASTCRT MTIANTGGVL VLLVVFLTGG
0701: FLLPRSEIPV WWRWAYWISP LSYAFNAITV NELFAPRWMN KMSGNSTTRL GTSVLNIWDV FDDKNWYWIG VGGLLGFTVI FNGFFTLALT YLDPLGKAQA
0801: ILPKEEDEEA KGKAGSNKET EMESVSAKKG MVLPFTPLAM SFDDVKYFVD MPAEMREQGV QETRLQLLKG VTSAFRPGVL TALMGVSGAG KTTLMDVLAG
0901: RKTGGYIEGD VRVSGFPKKQ ETFARISGYC EQTDIHSPQV TVRESLIFSA FLRLAKEVSK EDKLMFVDQV MELVELVDLR DAIVGLPGVT GLSTEQRKRL
1001: TIAVELVANP SIIFMDEPTS GLDARAAAIV MRAVRNTVDT GRTVVCTIHQ PSIDIFEAFD ELLLMKRGGH VIYSGPLGRN SHKVVEYFES FPGVPKIPEK
1101: YNPATWMLEA SSLAAELKLG VDFAELYKAS ALCQRNKALV QELSVPPQGA TDLYFATQFS QNTWGQFKSC LWKQWWTYWR SPDYNLVRFI FTLATSLMIG
1201: SVFWQIGGKR SNVQDLTMVI GAIYAAVVFV GINNCSTVQP MVAVERTVFY REKAAGMYSA IPYAISQVTC ELPYVLIQTT YYSLIIYSMV GFEWKASKFL
1301: WFIFINYFSF LYWTYYGMMT VSLTPNQQVA SIFASAFYGI FNLFSGFFIP RPKIPKWWVW YYWICPVAWT IYGLITSQYG DVETPIALLG GAPGLTVKQY
1401: IKDQYGFESD YMGPVAGVLV GFTVFFAFIF AFCIKTLNFQ SR
0101: FIDMVFKVAE QDNERILTKL RNRIDRVGIQ LPTVEVRYDH LTVKADCYTG DRSLPSLLNA VRNMGEAALG MIGIRLAKKA QLTILKDVSG IVKPSRMTLL
0201: LGPPSSGKTT LLLALAGKLD KSLDVSGEVT YNGYRLNEFV PIKTSAYISQ NDLHVGIMTV KETLDFSARC QGVGTRYDLL NELARREKDA GIFPEADVDL
0301: FMKASAAQGV KSSLITDYTL KILGLDICKD TIVGDDMMRG ISGGQKKRVT TGEMIVGPTK TLFMDEISTG LDSSTTFQIV KCLQQIVHLT EATVLISLLQ
0401: PAPETFDLFD DIILLSEGQI VYQGPRDHIL EFFESFGFKC PERKGTADFL QEVTSKKDQE QYWVDPNRPY RYIPVSEFAS SFKKFHVGSK LSNELSVPYD
0501: KSKSHKAALM FDKYSIKKTE LLKSCWDKEW MLMKRNSFFY VFKTVQIIII AAITSTLYLR TEMHTRNEID ANIYVGSLLF AMIVNMFNGL AEMAMTIQRL
0601: PVFYKQRDLL FHPPWTYTLP TFLLGIPISI FESTAWMVVT YYSIGYAPDA ERFFKQFLII FLIQQMAAGI FRFIASTCRT MTIANTGGVL VLLVVFLTGG
0701: FLLPRSEIPV WWRWAYWISP LSYAFNAITV NELFAPRWMN KMSGNSTTRL GTSVLNIWDV FDDKNWYWIG VGGLLGFTVI FNGFFTLALT YLDPLGKAQA
0801: ILPKEEDEEA KGKAGSNKET EMESVSAKKG MVLPFTPLAM SFDDVKYFVD MPAEMREQGV QETRLQLLKG VTSAFRPGVL TALMGVSGAG KTTLMDVLAG
0901: RKTGGYIEGD VRVSGFPKKQ ETFARISGYC EQTDIHSPQV TVRESLIFSA FLRLAKEVSK EDKLMFVDQV MELVELVDLR DAIVGLPGVT GLSTEQRKRL
1001: TIAVELVANP SIIFMDEPTS GLDARAAAIV MRAVRNTVDT GRTVVCTIHQ PSIDIFEAFD ELLLMKRGGH VIYSGPLGRN SHKVVEYFES FPGVPKIPEK
1101: YNPATWMLEA SSLAAELKLG VDFAELYKAS ALCQRNKALV QELSVPPQGA TDLYFATQFS QNTWGQFKSC LWKQWWTYWR SPDYNLVRFI FTLATSLMIG
1201: SVFWQIGGKR SNVQDLTMVI GAIYAAVVFV GINNCSTVQP MVAVERTVFY REKAAGMYSA IPYAISQVTC ELPYVLIQTT YYSLIIYSMV GFEWKASKFL
1301: WFIFINYFSF LYWTYYGMMT VSLTPNQQVA SIFASAFYGI FNLFSGFFIP RPKIPKWWVW YYWICPVAWT IYGLITSQYG DVETPIALLG GAPGLTVKQY
1401: IKDQYGFESD YMGPVAGVLV GFTVFFAFIF AFCIKTLNFQ SR
Arabidopsis Description
ABCG35PDR7 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.