Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g008360.2.1 | Tomato | cytosol | 96.52 | 96.52 |
| KRH41344 | Soybean | cytosol | 36.82 | 35.41 |
| KRH60065 | Soybean | cytosol | 36.82 | 34.58 |
| GSMUA_Achr7P24320_001 | Banana | plastid | 19.9 | 27.78 |
| PGSC0003DMT400029320 | Potato | cytosol | 29.35 | 27.57 |
| PGSC0003DMT400031886 | Potato | cytosol | 25.87 | 27.37 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400014973 | EnsemblPlantsGene:PGSC0003DMG400005843 | EntrezGene:102582982 | InterPro:DUF4228_plant | PANTHER:PTHR33148 | PANTHER:PTHR33148:SF13 |
| PFAM:PF14009 | PGSC:PGSC0003DMG400005843 | RefSeq:XP_006352243.1 | UniParc:UPI000296DD07 | UniProt:M1A571 | MapMan:35.2 |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400005843]
Coordinates
chr8:-:5221541..5225002
Molecular Weight (calculated)
22564.0 Da
IEP (calculated)
8.622
GRAVY (calculated)
-0.480
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCNCSMKS VRDSRKSSDL NFARVMTDSG EILNLKGPKL VRQVLNEFPG YNIFSSNCLS SPLHNQELLL DGQFYYLQPV IQNKTEPILV EEEKTERIRV
101: SSSLTKGSAM EVLPAQREGV WRVKLIINPQ QLEEIFSEEG NTEALIEQMR IAANTSSIAK HTRSTSCGVN WKSTLPSVYK LPNEKQNKIL ALDKSSTSSP
201: R
101: SSSLTKGSAM EVLPAQREGV WRVKLIINPQ QLEEIFSEEG NTEALIEQMR IAANTSSIAK HTRSTSCGVN WKSTLPSVYK LPNEKQNKIL ALDKSSTSSP
201: R
001: MGNCVFKGNG GSRKLYDKDD SLIKVVTPNG GVMELHPPIF AEFITNEFPG HVIHDSLSLR HSSPPLLHGE ELFPGNIYYL LPLSSSAAAT AQLDSSDQLS
101: TPYRMSFGKT PIMAALSGGG CGVWKVRLVI SPEQLAEILA EDVETEALVE SVRTVAKCGG YGCGGGVHSR ANSDQLSVTS SFKGKLW
101: TPYRMSFGKT PIMAALSGGG CGVWKVRLVI SPEQLAEILA EDVETEALVE SVRTVAKCGG YGCGGGVHSR ANSDQLSVTS SFKGKLW
Arabidopsis Description
At3g61920 [Source:UniProtKB/TrEMBL;Acc:Q9M273]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.