Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0025g02720.t01 | Wine grape | cytosol | 57.37 | 55.61 |
| KRG91592 | Soybean | cytosol | 54.21 | 43.83 |
| KRH38354 | Soybean | cytosol | 55.79 | 43.09 |
| KRH08843 | Soybean | cytosol | 55.26 | 43.03 |
| KRH35232 | Soybean | cytosol | 53.68 | 41.3 |
| PGSC0003DMT400029320 | Potato | cytosol | 41.58 | 36.92 |
| AT1G64700.1 | Thale cress | cytosol | 37.37 | 34.98 |
| CDY03362 | Canola | cytosol | 25.26 | 31.17 |
| CDY66852 | Canola | cytosol | 25.26 | 31.17 |
| Bra022910.1-P | Field mustard | cytosol | 15.26 | 30.21 |
| PGSC0003DMT400014973 | Potato | nucleus | 27.37 | 25.87 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400031886 | EnsemblPlantsGene:PGSC0003DMG400012229 | EntrezGene:107059974 | InterPro:DUF4228_plant | PANTHER:PTHR33148 | PANTHER:PTHR33148:SF10 |
| PFAM:PF14009 | PGSC:PGSC0003DMG400012229 | RefSeq:XP_015162597.1 | SEG:seg | UniParc:UPI000296503D | UniProt:M1AWF2 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400012229]
Coordinates
chr8:+:56747031..56747839
Molecular Weight (calculated)
21362.5 Da
IEP (calculated)
8.681
GRAVY (calculated)
-0.303
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCLFGGNE DMMVKVVTST GGIMEFVAPV TVEFIAEEFP GHGIFRSHDL FWKPLPAAQV LLAGDSYYLL PLNKQESSNI NIEIGHVRSN SVPQIQNLPY
101: RMSFDSQGRS EALYRYNNSN SKKKKRSRFW KVKLVITPKQ LLEILSQETT TQEFIENVTT VAKCGKTGFS DSWSLSSSRN TTSHALFSLE
101: RMSFDSQGRS EALYRYNNSN SKKKKRSRFW KVKLVITPKQ LLEILSQETT TQEFIENVTT VAKCGKTGFS DSWSLSSSRN TTSHALFSLE
001: MGNCLFGGLG DEEEDLLIKV IKSDGGVLEF YSPVTAGFVS HGFSGHALFS AVDLLWKPLA HDHLLVPGQS YYLFPNIVSD ELKTFVGSCH VRSNSESLSA
101: ITPYRMSLDY NHRVLKRSYT DVFSRNSHIR TRQKEKKTRR RRTSSKGAIW KVNLIINTEE LLQILSEDGR TNELIESVRA VAKGETSSIT SSSSENFLSV
201: VQT
101: ITPYRMSLDY NHRVLKRSYT DVFSRNSHIR TRQKEKKTRR RRTSSKGAIW KVNLIINTEE LLQILSEDGR TNELIESVRA VAKGETSSIT SSSSENFLSV
201: VQT
Arabidopsis Description
At1g64700 [Source:UniProtKB/TrEMBL;Acc:Q9XIS1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.