CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35232	Soybean	cytosol	93.19	88.66
VIT_02s0025g02720.t01	Wine grape	cytosol	49.79	59.69
KRH08843	Soybean	cytosol	58.72	56.56
KRH38354	Soybean	cytosol	59.15	56.5
PGSC0003DMT400031886	Potato	cytosol	43.83	54.21
KRH06376	Soybean	nucleus	37.45	44.22
KRH47813	Soybean	nucleus	36.17	43.15
AT1G64700.1	Thale cress	cytosol	36.6	42.36
KRG97236	Soybean	cytosol	34.47	37.85
Bra022910.1-P	Field mustard	cytosol	15.32	37.5
KRH68957	Soybean	nucleus	32.34	37.25
CDY03362	Canola	cytosol	23.4	35.71
CDY66852	Canola	cytosol	23.4	35.71
KRH41344	Soybean	cytosol	21.7	24.4
KRH60065	Soybean	cytosol	21.28	23.36

Protein Annotations

EMBL:ACUP02012692	EnsemblPlants:KRG91592	EnsemblPlantsGene:GLYMA_20G163000	EntrezGene:100804894	InterPro:DUF4228_plant	PANTHER:PTHR33148
PANTHER:PTHR33148:SF10	PFAM:PF14009	ProteinID:KRG91592	ProteinID:KRG91592.1	SEG:seg	UniParc:UPI000233D8ED
UniProt:I1NGY4	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:40055267..40056521

Molecular Weight (calculated)

25406.9 Da

IEP (calculated)

7.302

GRAVY (calculated)

-0.241

Length

235 amino acids

Sequence
(BLAST)

001: MGNCFFGAMS DPDAAAIKVI TSNGGIMEFS APVTVSFITN EFPGHAMFRS HDLFWKPLSQ FDELEPGQSY YLLPLSNNNN NNNNSKNTDS TLPCGGENIN
101: VVVRQGHVRS HSVPTISNPA LYRMSLDYHH HHQGMGLLKR SSNNIDAFSS RSSGVVNSSN NIGGGGSSRF WKVKLVISPE QLLDILAQEA RTKELIESVR
201: MVAKCGIAGG AISNSAAGMI SDHWSLSSTS WSISS

Best Arabidopsis Sequence Match ( AT1G64700.1 )
(BLAST)

001: MGNCLFGGLG DEEEDLLIKV IKSDGGVLEF YSPVTAGFVS HGFSGHALFS AVDLLWKPLA HDHLLVPGQS YYLFPNIVSD ELKTFVGSCH VRSNSESLSA
101: ITPYRMSLDY NHRVLKRSYT DVFSRNSHIR TRQKEKKTRR RRTSSKGAIW KVNLIINTEE LLQILSEDGR TNELIESVRA VAKGETSSIT SSSSENFLSV
201: VQT

Arabidopsis Description

At1g64700 [Source:UniProtKB/TrEMBL;Acc:Q9XIS1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.