Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03362 | Canola | cytosol | 45.81 | 60.39 |
| CDY66852 | Canola | cytosol | 45.81 | 60.39 |
| Bra022910.1-P | Field mustard | cytosol | 22.66 | 47.92 |
| VIT_02s0025g02720.t01 | Wine grape | cytosol | 45.32 | 46.94 |
| PGSC0003DMT400031886 | Potato | cytosol | 34.98 | 37.37 |
| KRG91592 | Soybean | cytosol | 42.36 | 36.6 |
| KRH35232 | Soybean | cytosol | 41.87 | 34.41 |
| AT3G61920.1 | Thale cress | cytosol | 31.53 | 34.22 |
| KRH38354 | Soybean | cytosol | 40.89 | 33.74 |
| KRH08843 | Soybean | cytosol | 40.39 | 33.61 |
Protein Annotations
| MapMan:35.2 | EntrezGene:842778 | ProteinID:AAD38246.1 | ProteinID:AAF19683.1 | ProteinID:AEE34275.1 | ArrayExpress:AT1G64700 |
| EnsemblPlantsGene:AT1G64700 | RefSeq:AT1G64700 | TAIR:AT1G64700 | RefSeq:AT1G64700-TAIR-G | EnsemblPlants:AT1G64700.1 | TAIR:AT1G64700.1 |
| EMBL:BT010669 | EMBL:BT010968 | InterPro:DUF4228_plant | RefSeq:NP_176651.1 | PFAM:PF14009 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR33148 | PANTHER:PTHR33148:SF10 |
| UniProt:Q9XIS1 | UniParc:UPI00000A10C9 | SEG:seg | : | : | : |
Description
At1g64700 [Source:UniProtKB/TrEMBL;Acc:Q9XIS1]
Coordinates
chr1:-:24039706..24040636
Molecular Weight (calculated)
22684.9 Da
IEP (calculated)
8.240
GRAVY (calculated)
-0.267
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCLFGGLG DEEEDLLIKV IKSDGGVLEF YSPVTAGFVS HGFSGHALFS AVDLLWKPLA HDHLLVPGQS YYLFPNIVSD ELKTFVGSCH VRSNSESLSA
101: ITPYRMSLDY NHRVLKRSYT DVFSRNSHIR TRQKEKKTRR RRTSSKGAIW KVNLIINTEE LLQILSEDGR TNELIESVRA VAKGETSSIT SSSSENFLSV
201: VQT
101: ITPYRMSLDY NHRVLKRSYT DVFSRNSHIR TRQKEKKTRR RRTSSKGAIW KVNLIINTEE LLQILSEDGR TNELIESVRA VAKGETSSIT SSSSENFLSV
201: VQT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.