Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- plastid 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_15s0048g02650.t01 | Wine grape | cytosol | 59.18 | 60.73 |
| PGSC0003DMT400031886 | Potato | cytosol | 55.61 | 57.37 |
| KRG91592 | Soybean | cytosol | 59.69 | 49.79 |
| KRH35232 | Soybean | cytosol | 62.24 | 49.39 |
| KRH38354 | Soybean | cytosol | 58.16 | 46.34 |
| KRH08843 | Soybean | cytosol | 56.63 | 45.49 |
| AT1G64700.1 | Thale cress | cytosol | 46.94 | 45.32 |
| CDY03362 | Canola | cytosol | 32.65 | 41.56 |
| CDY66852 | Canola | cytosol | 32.65 | 41.56 |
| Bra022910.1-P | Field mustard | cytosol | 18.88 | 38.54 |
Protein Annotations
| ArrayExpress:VIT_02s0025g02720 | EMBL:FN596251 | EnsemblPlants:VIT_02s0025g02720.t01 | EnsemblPlantsGene:VIT_02s0025g02720 | EntrezGene:100246209 | EntrezGene:LOC100246209 |
| InterPro:DUF4228_plant | PANTHER:PTHR33148 | PANTHER:PTHR33148:SF10 | PFAM:PF14009 | ProteinID:CCB58306 | ProteinID:CCB58306.1 |
| RefSeq:XP_002272423 | RefSeq:XP_002272423.1 | UniParc:UPI0001982D30 | UniProt:F6HU83 | wikigene:100246209 | wikigene:LOC100246209 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:2356690..2357477
Molecular Weight (calculated)
21432.5 Da
IEP (calculated)
6.387
GRAVY (calculated)
-0.149
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCLFGGLG EAGAVIKVVT SNGGIMEFYA PVTAECITNE FPGHGIFRSH DLFWKPLSHH EELHPGESYF LLPINNTGSS TGGHVAQVGH VRSNSVPTSL
101: VAPYRMSFEN QGMLKRSYTD VFSRYNNTGV WKVKLVICPE QLLEILSQEA RTQELIESVR TVAKCGNGVS PMGFSDQWSF SSSMNASSKQ DGLLEI
101: VAPYRMSFEN QGMLKRSYTD VFSRYNNTGV WKVKLVICPE QLLEILSQEA RTQELIESVR TVAKCGNGVS PMGFSDQWSF SSSMNASSKQ DGLLEI
001: MGNCLFGGLG DEEEDLLIKV IKSDGGVLEF YSPVTAGFVS HGFSGHALFS AVDLLWKPLA HDHLLVPGQS YYLFPNIVSD ELKTFVGSCH VRSNSESLSA
101: ITPYRMSLDY NHRVLKRSYT DVFSRNSHIR TRQKEKKTRR RRTSSKGAIW KVNLIINTEE LLQILSEDGR TNELIESVRA VAKGETSSIT SSSSENFLSV
201: VQT
101: ITPYRMSLDY NHRVLKRSYT DVFSRNSHIR TRQKEKKTRR RRTSSKGAIW KVNLIINTEE LLQILSEDGR TNELIESVRA VAKGETSSIT SSSSENFLSV
201: VQT
Arabidopsis Description
At1g64700 [Source:UniProtKB/TrEMBL;Acc:Q9XIS1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.