Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03362 | Canola | cytosol | 100.0 | 100.0 |
| Bra022910.1-P | Field mustard | cytosol | 40.26 | 64.58 |
| AT1G64700.1 | Thale cress | cytosol | 60.39 | 45.81 |
| VIT_02s0025g02720.t01 | Wine grape | cytosol | 41.56 | 32.65 |
| CDY11383 | Canola | cytosol | 27.27 | 25.77 |
| PGSC0003DMT400031886 | Potato | cytosol | 31.17 | 25.26 |
| CDY62168 | Canola | cytosol | 29.22 | 24.06 |
| KRG91592 | Soybean | cytosol | 35.71 | 23.4 |
| KRH35232 | Soybean | cytosol | 35.71 | 22.27 |
| KRH08843 | Soybean | cytosol | 35.06 | 22.13 |
| KRH38354 | Soybean | cytosol | 34.42 | 21.54 |
Protein Annotations
| EnsemblPlants:CDY66852 | EnsemblPlantsGene:GSBRNA2T00056704001 | PANTHER:PTHR33148 | PANTHER:PTHR33148:SF10 | ProteinID:CDY66852 | ProteinID:CDY66852.1 |
| SEG:seg | UniParc:UPI0004EEC250 | UniProt:A0A078EQK8 | MapMan:35.2 | : | : |
Description
BnaA09g52880DBnaA09g52880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078EQK8]
Coordinates
chrLK035521:-:716..1251
Molecular Weight (calculated)
17440.2 Da
IEP (calculated)
10.040
GRAVY (calculated)
-0.439
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCLFGGLG NMEEYLPTKV IKPDSGVLEF FSPIAAGSNE LKTSVGNCHV RSNSESLPMI TPYGMSLDYN HRVLKRSYTN VFSRKTRHKE KKKTRKRMRN
101: KGDIWKVKLV INTEELLQIL SEEGRTNELI ESVRAVAKCE NFVASEMNLS VVKV
101: KGDIWKVKLV INTEELLQIL SEEGRTNELI ESVRAVAKCE NFVASEMNLS VVKV
001: MGNCLFGGLG DEEEDLLIKV IKSDGGVLEF YSPVTAGFVS HGFSGHALFS AVDLLWKPLA HDHLLVPGQS YYLFPNIVSD ELKTFVGSCH VRSNSESLSA
101: ITPYRMSLDY NHRVLKRSYT DVFSRNSHIR TRQKEKKTRR RRTSSKGAIW KVNLIINTEE LLQILSEDGR TNELIESVRA VAKGETSSIT SSSSENFLSV
201: VQT
101: ITPYRMSLDY NHRVLKRSYT DVFSRNSHIR TRQKEKKTRR RRTSSKGAIW KVNLIINTEE LLQILSEDGR TNELIESVRA VAKGETSSIT SSSSENFLSV
201: VQT
Arabidopsis Description
At1g64700 [Source:UniProtKB/TrEMBL;Acc:Q9XIS1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.