CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38354	Soybean	cytosol	89.75	89.02
KRG91592	Soybean	cytosol	56.56	58.72
KRH35232	Soybean	cytosol	57.38	56.68
VIT_02s0025g02720.t01	Wine grape	cytosol	45.49	56.63
PGSC0003DMT400031886	Potato	cytosol	43.03	55.26
KRH47813	Soybean	nucleus	36.07	44.67
KRH06376	Soybean	nucleus	36.07	44.22
AT1G64700.1	Thale cress	cytosol	33.61	40.39
KRG97236	Soybean	cytosol	33.61	38.32
KRH68957	Soybean	nucleus	31.56	37.75
CDY03362	Canola	cytosol	22.13	35.06
CDY66852	Canola	cytosol	22.13	35.06
Bra022910.1-P	Field mustard	cytosol	13.52	34.38
KRH41344	Soybean	cytosol	21.31	24.88
KRH60065	Soybean	cytosol	21.31	24.3

Protein Annotations

EMBL:ACUP02010211	EnsemblPlants:KRH08843	EnsemblPlantsGene:GLYMA_16G177600	EntrezGene:100798954	InterPro:DUF4228_plant	PANTHER:PTHR33148
PANTHER:PTHR33148:SF10	PFAM:PF14009	ProteinID:KRH08843	ProteinID:KRH08843.1	SEG:seg	UniParc:UPI000233E4DB
UniProt:I1MPG9	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:33874012..33875343

Molecular Weight (calculated)

26581.9 Da

IEP (calculated)

9.213

GRAVY (calculated)

-0.177

Length

244 amino acids

Sequence
(BLAST)

001: MGNCLLGGMS DPDTIIKVTT SNGGIMEFYA PITVSFITSE FPGHGIFLSH DLFCKPLSQF DELVAGQSYY LLPLNNQPEH PSASGHIGGD NRAIRLGHVR
101: SHSVPTTPYP PPYRMSLDYQ HHQGMRFLNK TSTEPFSCRT STIKRSKITT SSKRSKITSS SKSSRFWKVK LVITPQQLMD ILSQEARTKE LIESVRIVAK
201: CGVAAGGILP VSAAASIVSD QWSLSSSGRS ACDSSKIDAL VVDM

Best Arabidopsis Sequence Match ( AT1G64700.1 )
(BLAST)

001: MGNCLFGGLG DEEEDLLIKV IKSDGGVLEF YSPVTAGFVS HGFSGHALFS AVDLLWKPLA HDHLLVPGQS YYLFPNIVSD ELKTFVGSCH VRSNSESLSA
101: ITPYRMSLDY NHRVLKRSYT DVFSRNSHIR TRQKEKKTRR RRTSSKGAIW KVNLIINTEE LLQILSEDGR TNELIESVRA VAKGETSSIT SSSSENFLSV
201: VQT

Arabidopsis Description

At1g64700 [Source:UniProtKB/TrEMBL;Acc:Q9XIS1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.