Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g051430.2.1 | Tomato | cytosol, extracellular, peroxisome | 25.6 | 49.61 |
| PGSC0003DMT400035884 | Potato | mitochondrion | 24.0 | 24.19 |
| VIT_00s0199g00270.t01 | Wine grape | cytosol, mitochondrion, nucleus | 5.2 | 8.61 |
| PGSC0003DMT400041792 | Potato | cytosol | 5.2 | 7.26 |
| PGSC0003DMT400041791 | Potato | cytosol | 5.6 | 6.09 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400037790 | EnsemblPlantsGene:PGSC0003DMG400014582 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:FSH_dom | InterPro:IPR029058 |
| PANTHER:PTHR22778 | PANTHER:PTHR22778:SF25 | PFAM:PF03959 | PGSC:PGSC0003DMG400014582 | SUPFAM:SSF53474 | UniParc:UPI000294B92E |
| UniProt:M1B5X3 | MapMan:35.2 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400014582]
Coordinates
chr5:-:46186916..46193076
Molecular Weight (calculated)
28371.0 Da
IEP (calculated)
8.348
GRAVY (calculated)
0.068
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MCLHGHATSA NILKKELELG WPQYLLDKLD LVFLDAPFLL QDKVDAHDIF YPPYYEWFQA TEDYKEIYNF EECIQYVEAN MVKYGPFDGV LGLSQGAVVA
101: ASMPGMQRDR VALTKVPKIK FVMLIAGSKF GGISLGCPKL ASNAFAYPIE CTSLHFIVYA LKFHARIFRE RTQEEKGGEK VKNCQVLAIL VAESAKDSIL
201: RGILQKMGPK PTMHVMEVID NPKHSLWYFR PKLLGLGCGR TIWVRIVFMI
101: ASMPGMQRDR VALTKVPKIK FVMLIAGSKF GGISLGCPKL ASNAFAYPIE CTSLHFIVYA LKFHARIFRE RTQEEKGGEK VKNCQVLAIL VAESAKDSIL
201: RGILQKMGPK PTMHVMEVID NPKHSLWYFR PKLLGLGCGR TIWVRIVFMI
001: MGSEGRSIAR KPRFLCLHGF RTSGEIMKIQ LHKWPKSVID RLDLVFLDAP FPCQGKSDVE GIFDPPYYEW FQFNKEFTEY TNFEKCLEYL EDRMIKLGPF
101: DGLIGFSQGA ILSGGLPGLQ AKGIAFQKVP KIKFVIIIGG AKLKSAKLAE NAYSSSLETL SLHFLGTFCK S
101: DGLIGFSQGA ILSGGLPGLQ AKGIAFQKVP KIKFVIIIGG AKLKSAKLAE NAYSSSLETL SLHFLGTFCK S
Arabidopsis Description
INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BE /.../bidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G24380]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.