Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol, peroxisome
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- peroxisome 3
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400037790 | Potato | cytosol | 49.61 | 25.6 |
| Solyc04g074950.2.1 | Tomato | cytosol, mitochondrion, nucleus | 41.09 | 23.77 |
| Solyc04g074960.2.1 | Tomato | cytosol, mitochondrion, plastid | 41.86 | 21.01 |
| Solyc06g060570.2.1 | Tomato | cytosol | 34.11 | 17.12 |
| Solyc11g010420.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 0.78 | 0.43 |
| Solyc11g010430.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| VIT_00s0199g00270.t01 | Wine grape | cytosol, mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc05g051430.2.1 | EnsemblPlantsGene:Solyc05g051430.2 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:FSH_dom | InterPro:IPR029058 |
| PANTHER:PTHR22778 | PANTHER:PTHR22778:SF25 | PFAM:PF03959 | SUPFAM:SSF53474 | UniParc:UPI00027656E9 | UniProt:K4C1H4 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:-:61751929..61756746
Molecular Weight (calculated)
14180.6 Da
IEP (calculated)
7.560
GRAVY (calculated)
0.031
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKYGPFDGV LGFSQGAVIA ASMPGMQRDR VALTKVPKIK FVMLIAGGKF GGIELGCPIE CPSLHFIGEK DPHLLHEEEL AGCFVNPVVI HYPEGHKVPN
101: LDAERTEIVI EFINKVKKIK MPLQGNSRL
101: LDAERTEIVI EFINKVKKIK MPLQGNSRL
001: MLGYSYPCFQ TGLRLTTAMA PEIHLKPKNP RILCLHGFRT SGRILQAGIG KWPDTILRDL DLDFLDAPFP ATGKSDVERF FDPPYYEWYQ ANKGFKEYRN
101: FEECLAYIED YMIKNGPFDG LLGFSQGAFL TAAIPGMQEQ GSALTKVPKV KFLVIISGAK IPGLMFGEPK AAVNAFSSPV RCPSLHFIGE RDFLKIEGEV
201: LVESFVEPVV IHHSGGHIIP KLDTKAEETM LSFFQSIRQM LSDESGSVRS LM
101: FEECLAYIED YMIKNGPFDG LLGFSQGAFL TAAIPGMQEQ GSALTKVPKV KFLVIISGAK IPGLMFGEPK AAVNAFSSPV RCPSLHFIGE RDFLKIEGEV
201: LVESFVEPVV IHHSGGHIIP KLDTKAEETM LSFFQSIRQM LSDESGSVRS LM
Arabidopsis Description
alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G65400]
SUBAcon: [plastid,mitochondrion]
SUBAcon: [plastid,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.