Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 3
- nucleus 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400041792 | Potato | cytosol | 67.23 | 88.27 |
| Solyc11g010430.1.1 | Tomato | cytosol | 72.77 | 76.0 |
| KRH69648 | Soybean | cytosol | 43.83 | 64.38 |
| KRH69644 | Soybean | cytosol | 56.6 | 58.85 |
| Solyc04g074950.2.1 | Tomato | cytosol, mitochondrion, nucleus | 9.36 | 9.87 |
| Solyc04g074960.2.1 | Tomato | cytosol, mitochondrion, plastid | 9.36 | 8.56 |
| Bra031860.1-P | Field mustard | mitochondrion | 8.09 | 8.15 |
| CDY33961 | Canola | plastid | 8.09 | 7.34 |
| CDY37826 | Canola | plastid | 8.09 | 7.31 |
| AT5G65400.2 | Thale cress | cytosol | 8.09 | 7.04 |
| Solyc06g060570.2.1 | Tomato | cytosol | 6.81 | 6.23 |
| Solyc05g051430.2.1 | Tomato | cytosol, extracellular, peroxisome | 0.43 | 0.78 |
Protein Annotations
| EnsemblPlants:Solyc11g010420.1.1 | EnsemblPlantsGene:Solyc11g010420.1 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:FSH_dom | InterPro:IPR029058 |
| PANTHER:PTHR22778 | PANTHER:PTHR22778:SF25 | PFAM:PF03959 | SUPFAM:SSF53474 | UniParc:UPI000276963E | UniProt:K4D5K3 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:3485517..3488338
Molecular Weight (calculated)
26725.5 Da
IEP (calculated)
7.908
GRAVY (calculated)
-0.184
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKESNKKPR ILCLHGYRES AKILKKLIFR WPESVTGKLD LIFLDAPFPA KGKSRLEGYF DPPYFEWFQF NKDFTEFYNF EECLEYIEEF MSKHGPFDGI
101: LGFSMAAVLC AAIPGMQREG VALTKVPKIK FVILISGAKF GGPSFGVPKL AVNAFSYPIS CPSLHFLGEK DYQKKDGEVL LECFVDPQVI HHPKGHAIPE
201: LDDSSAEIIL GFIEKTFQNL GTRAHQYNRK PMAKF
101: LGFSMAAVLC AAIPGMQREG VALTKVPKIK FVILISGAKF GGPSFGVPKL AVNAFSYPIS CPSLHFLGEK DYQKKDGEVL LECFVDPQVI HHPKGHAIPE
201: LDDSSAEIIL GFIEKTFQNL GTRAHQYNRK PMAKF
001: MLGHKDNSKP EKRARACQML GYSYPCFQTG LRLTTAMAPE IHLKPKNPRI LCLHGFRTSG RILQAGIGKW PDTILRDLDL DFLDAPFPAT GKSDVERFFD
101: PPYYEWYQAN KGFKEYRNFE ECLAYIEDYM IKNGPFDGLL GFSQGAFLTA AIPGMQEQGS ALTKVPKVKF LVIISGAKIP GLMFGEPKAA VNAFSSPVRC
201: PSLHFIGERD FLKIEGEVLV ESFVEPVVIH HSGGHIIPKL DTKAEETMLS FFQSIRQMLS DESGSVRSLM
101: PPYYEWYQAN KGFKEYRNFE ECLAYIEDYM IKNGPFDGLL GFSQGAFLTA AIPGMQEQGS ALTKVPKVKF LVIISGAKIP GLMFGEPKAA VNAFSSPVRC
201: PSLHFIGERD FLKIEGEVLV ESFVEPVVIH HSGGHIIPKL DTKAEETMLS FFQSIRQMLS DESGSVRSLM
Arabidopsis Description
alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G65400]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.