CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031860.1-P	Field mustard	mitochondrion	87.64	97.42
CDY37826	Canola	plastid	92.66	92.31
AT5G65400.2	Thale cress	cytosol	74.13	71.11
CDY34285	Canola	cytosol	44.79	50.43
CDY03451	Canola	cytosol	44.02	49.57
CDY08935	Canola	cytosol, mitochondrion	42.47	46.81
CDY24838	Canola	mitochondrion	42.47	46.81
CDY27197	Canola	cytosol	7.72	13.42
CDY51259	Canola	cytosol	7.72	13.42
CDY47377	Canola	cytosol	7.72	13.42
CDY35428	Canola	cytosol	7.72	13.42
CDY22503	Canola	cytosol	7.72	13.42
CDX76012	Canola	cytosol	7.72	13.42
CDX67656	Canola	cytosol	7.72	13.42
VIT_00s0199g00270.t01	Wine grape	cytosol, mitochondrion, nucleus	7.72	13.24
KRH69648	Soybean	cytosol	8.11	13.12
CDY16599	Canola	cytosol	7.34	12.75
CDY09106	Canola	cytosol	7.34	12.75
CDX88824	Canola	cytosol	7.34	12.75
CDX87950	Canola	cytosol	7.34	12.75
CDX70966	Canola	cytosol	7.34	12.75
PGSC0003DMT400041792	Potato	cytosol	6.56	9.5
KRH69644	Soybean	cytosol	8.11	9.29
Solyc11g010420.1.1	Tomato	cytosol, peroxisome, plasma membrane	7.34	8.09
Solyc11g010430.1.1	Tomato	cytosol	6.95	8.0
PGSC0003DMT400041791	Potato	cytosol	6.95	7.83

Protein Annotations

EnsemblPlants:CDY33961	EnsemblPlantsGene:GSBRNA2T00055799001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:FSH_dom	InterPro:IPR029058
PANTHER:PTHR22778	PANTHER:PTHR22778:SF25	PFAM:PF03959	ProteinID:CDY33961	ProteinID:CDY33961.1	SUPFAM:SSF53474
UniParc:UPI0004EEA191	UniProt:A0A078H800	MapMan:35.2	:	:	:

Description

BnaC02g43760DBnaC02g43760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H800]

Coordinates

chrLK032325:-:158227..159824

Molecular Weight (calculated)

29240.3 Da

IEP (calculated)

8.708

GRAVY (calculated)

-0.217

Length

259 amino acids

Sequence
(BLAST)

001: MLSHSHPCCQ TASVSRPPRL SFKITAMLSE SKQRNPRILC LHGFRTSGLI LRSLITSKWP DTVLRNLDLD FLDGPFPATG KSDIERFYDP PYYEWYQASK
101: GFREYRNFEE CLDYVEDYMI KHGPFDGLLG FSQGAFLSAA LPRMQEQGKA LTKVPKVKFL VLISGGKIPG LRFGQPKAAV GAFSSPVRCP SLHFIGERDF
201: LKTEGEVLVE SFVEPVVIRH TSGHTIPKLE TEAEETVLSF FQRIRKMLSD EASSVRSLM

Best Arabidopsis Sequence Match ( AT5G65400.1 )
(BLAST)

001: MLGYSYPCFQ TGLRLTTAMA PEIHLKPKNP RILCLHGFRT SGRILQAGIG KWPDTILRDL DLDFLDAPFP ATGKSDVERF FDPPYYEWYQ ANKGFKEYRN
101: FEECLAYIED YMIKNGPFDG LLGFSQGAFL TAAIPGMQEQ GSALTKVPKV KFLVIISGAK IPGLMFGEPK AAVNAFSSPV RCPSLHFIGE RDFLKIEGEV
201: LVESFVEPVV IHHSGGHIIP KLDTKAEETM LSFFQSIRQM LSDESGSVRS LM

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G65400]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.