CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70966	Canola	cytosol	100.0	100.0
CDX87950	Canola	cytosol	100.0	100.0
CDX88824	Canola	cytosol	100.0	100.0
CDY09106	Canola	cytosol	100.0	100.0
EES19728	Sorghum	cytosol	98.66	98.66
TraesCS4B01G178200.1	Wheat	cytosol, plastid, unclear	98.66	98.66
TraesCS2D01G097500.1	Wheat	cytosol	98.66	98.66
TraesCS2A01G098100.1	Wheat	cytosol	98.66	98.66
OQU86675	Sorghum	cytosol	98.66	98.66
KRH64911	Soybean	cytosol	98.66	98.66
KRH57715	Soybean	cytosol	98.66	98.66
KRG94210	Soybean	nucleus	98.66	98.66
HORVU4Hr1G052210.2	Barley	cytosol	98.66	98.66
HORVU3Hr1G040040.1	Barley	cytosol	98.66	98.66
CDX67656	Canola	cytosol	98.66	98.66
EER94946	Sorghum	cytosol	98.66	98.66
CDY47377	Canola	cytosol	98.66	98.66
CDX76012	Canola	cytosol	98.66	98.66
CDY35428	Canola	cytosol	98.66	98.66
CDY27197	Canola	cytosol	98.66	98.66
CDY51259	Canola	cytosol	98.66	98.66
CDY22503	Canola	cytosol	98.66	98.66
TraesCS1B01G319400.1	Wheat	cytosol	97.99	97.99
TraesCS4D01G179800.1	Wheat	cytosol	97.99	97.99
TraesCS4A01G126700.1	Wheat	cytosol	97.99	97.99
TraesCS1D01G308100.1	Wheat	cytosol, nucleus, plastid, unclear	97.99	97.99
HORVU0Hr1G001270.1	Barley	cytosol	97.99	97.99
TraesCS3B01G214400.1	Wheat	cytosol	95.3	97.26
Zm00001d007194_P001	Maize	cytosol	61.74	93.88
Zm00001d040323_P001	Maize	cytosol	63.09	83.19
Zm00001d010650_P001	Maize	cytosol	62.42	82.3
CDY03451	Canola	cytosol	16.78	10.87
CDY34285	Canola	cytosol	16.78	10.87
CDY24838	Canola	mitochondrion	15.44	9.79
CDY08935	Canola	cytosol, mitochondrion	15.44	9.79
CDY37826	Canola	plastid	13.42	7.69
CDY33961	Canola	plastid	12.75	7.34

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	GO:A0A078FUD5	UniProt:A0A078FUD5	ProteinID:CDY09106.1	EnsemblPlants:CDY16599
ProteinID:CDY16599	ProteinID:CDY16599.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	EnsemblPlantsGene:GSBRNA2T00094407001	InterPro:IPR002048	PFAM:PF13499	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR23050	PANTHER:PTHR23050:SF250	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI00000007FC

Description

BnaC09g36740DBnaA02g05320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUD5]

Coordinates

chrLK032065:-:583588..584848

Molecular Weight (calculated)

16834.6 Da

IEP (calculated)

3.871

GRAVY (calculated)

-0.619

Length

149 amino acids

Sequence
(BLAST)

001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYD EFVKVMMAK

Best Arabidopsis Sequence Match ( AT3G43810.2 )
(BLAST)

001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMANH VWECASKLIK KRKKKKKKKK KKKTKNAKRN EKELIQHNPS QPESHRVPSR
201: LNLLCHRSHS CSIL

Arabidopsis Description

CAM7Calmodulin 7 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPJ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.