Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G178200.1 | Wheat | cytosol, plastid, unclear | 98.63 | 96.64 |
| OQU86675 | Sorghum | cytosol | 98.63 | 96.64 |
| TraesCS1B01G319400.1 | Wheat | cytosol | 97.95 | 95.97 |
| CDX70966 | Canola | cytosol | 97.26 | 95.3 |
| KRH73482 | Soybean | cytosol | 97.26 | 95.3 |
| KRH64911 | Soybean | cytosol | 97.26 | 95.3 |
| KRH57715 | Soybean | cytosol | 97.26 | 95.3 |
| KRH14671 | Soybean | cytosol | 97.26 | 95.3 |
| KRG94210 | Soybean | nucleus | 97.26 | 95.3 |
| CDY51259 | Canola | cytosol | 97.26 | 95.3 |
| CDY47377 | Canola | cytosol | 97.26 | 95.3 |
| CDY35428 | Canola | cytosol | 97.26 | 95.3 |
| CDY27197 | Canola | cytosol | 97.26 | 95.3 |
| CDY22503 | Canola | cytosol | 97.26 | 95.3 |
| CDY16599 | Canola | cytosol | 97.26 | 95.3 |
| CDY09106 | Canola | cytosol | 97.26 | 95.3 |
| CDX88824 | Canola | cytosol | 97.26 | 95.3 |
| CDX87950 | Canola | cytosol | 97.26 | 95.3 |
| CDX76012 | Canola | cytosol | 97.26 | 95.3 |
| CDX67656 | Canola | cytosol | 97.26 | 95.3 |
| Zm00001d007194_P001 | Maize | cytosol | 60.27 | 89.8 |
| Zm00001d010650_P001 | Maize | cytosol | 60.96 | 78.76 |
| Zm00001d040323_P001 | Maize | cytosol | 60.27 | 77.88 |
| TraesCS2B01G336000.1 | Wheat | mitochondrion | 17.81 | 10.66 |
| TraesCS2B01G336100.2 | Wheat | mitochondrion, plastid | 8.9 | 7.69 |
| TraesCS2B01G113900.1 | Wheat | cytosol | 10.96 | 6.48 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G214400.1 | EnsemblPlantsGene:TraesCS3B01G214400 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF250 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 | TIGR:cd00051 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:254776158..254779959
Molecular Weight (calculated)
16484.1 Da
IEP (calculated)
3.830
GRAVY (calculated)
-0.600
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQLTDDQI AEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKLV
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKLV
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
Arabidopsis Description
CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.