Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G097600.1 | Wheat | cytosol | 98.38 | 98.38 |
| TraesCS2A01G098200.1 | Wheat | cytosol | 97.57 | 97.57 |
| Os07t0687100-01 | Rice | cytosol | 83.0 | 83.0 |
| Zm00001d007196_P001 | Maize | cytosol | 77.73 | 78.69 |
| GSMUA_Achr10P... | Banana | mitochondrion | 70.85 | 72.31 |
| KRG94970 | Soybean | cytosol | 70.45 | 64.93 |
| KRH64918 | Soybean | cytosol | 69.64 | 64.18 |
| VIT_08s0040g00440.t01 | Wine grape | mitochondrion | 65.99 | 62.45 |
| PGSC0003DMT400035884 | Potato | mitochondrion | 61.94 | 61.69 |
| Solyc06g060570.2.1 | Tomato | cytosol | 59.92 | 57.59 |
| Zm00001d022546_P001 | Maize | plastid | 80.57 | 50.0 |
| KXG37006 | Sorghum | cytosol | 80.57 | 48.07 |
| TraesCS2B01G336000.1 | Wheat | mitochondrion | 43.72 | 44.26 |
| VIT_11s0016g04330.t01 | Wine grape | cytosol, mitochondrion, nucleus | 25.1 | 40.52 |
| TraesCS2B01G336100.2 | Wheat | mitochondrion, plastid | 22.67 | 33.14 |
| TraesCS3B01G214400.1 | Wheat | cytosol | 6.48 | 10.96 |
| TraesCS4B01G178200.1 | Wheat | cytosol, plastid, unclear | 6.48 | 10.74 |
| TraesCS1B01G319400.1 | Wheat | cytosol | 6.48 | 10.74 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G113900.1 | EnsemblPlantsGene:TraesCS2B01G113900 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:FSH_dom | InterPro:IPR029058 |
| PANTHER:PTHR22778 | PANTHER:PTHR22778:SF22 | PFAM:PF03959 | SUPFAM:SSF53474 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr2B:+:77171302..77172946
Molecular Weight (calculated)
27310.3 Da
IEP (calculated)
5.001
GRAVY (calculated)
-0.309
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQEKKLKVL CLHGFRTSGG FLKKQISKWH PSILQQFDTV FPDGQFPAGG KSDIEGIFPP PYFEWFQFDK DFTEYTNLEE CIAYLCDYMV KNGPFDGLLG
101: FSQGATLSAL LIGYQAQGKV LNDHPPIKFM VSVSGSKFRD PSICDVAYKD PIKAKSVHFI GEKDWLKVPS EELASAFADP LIIRHPQGHT VPRLDEASVK
201: QLSEWSASIL EDLKNADAPK ASNSESSGGK DSVGVESAEN LMEQVAA
101: FSQGATLSAL LIGYQAQGKV LNDHPPIKFM VSVSGSKFRD PSICDVAYKD PIKAKSVHFI GEKDWLKVPS EELASAFADP LIIRHPQGHT VPRLDEASVK
201: QLSEWSASIL EDLKNADAPK ASNSESSGGK DSVGVESAEN LMEQVAA
001: MLGHKDNSKP EKRARACQML GYSYPCFQTG LRLTTAMAPE IHLKPKNPRI LCLHGFRTSG RILQAGIGKW PDTILRDLDL DFLDAPFPAT GKSDVERFFD
101: PPYYEWYQAN KGFKEYRNFE ECLAYIEDYM IKNGPFDGLL GFSQGAFLTA AIPGMQEQGS ALTKVPKVKF LVIISGAKIP GLMFGEPKAA VNAFSSPVRC
201: PSLHFIGERD FLKIEGEVLV ESFVEPVVIH HSGGHIIPKL DTKAEETMLS FFQSIRQMLS DESGSVRSLM
101: PPYYEWYQAN KGFKEYRNFE ECLAYIEDYM IKNGPFDGLL GFSQGAFLTA AIPGMQEQGS ALTKVPKVKF LVIISGAKIP GLMFGEPKAA VNAFSSPVRC
201: PSLHFIGERD FLKIEGEVLV ESFVEPVVIH HSGGHIIPKL DTKAEETMLS FFQSIRQMLS DESGSVRSLM
Arabidopsis Description
alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G65400]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.