CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64918	Soybean	cytosol	93.28	93.28
TraesCS2B01G113900.1	Wheat	cytosol	64.93	70.45
GSMUA_Achr10P...	Banana	mitochondrion	63.43	70.25
TraesCS2A01G098200.1	Wheat	cytosol	64.55	70.04
TraesCS2D01G097600.1	Wheat	cytosol	64.18	69.64
Os07t0687100-01	Rice	cytosol	63.06	68.42
VIT_08s0040g00440.t01	Wine grape	mitochondrion	66.42	68.2
Zm00001d007196_P001	Maize	cytosol	60.45	66.39
PGSC0003DMT400035884	Potato	mitochondrion	57.84	62.5
Solyc06g060570.2.1	Tomato	cytosol	56.72	59.14
KRH16812	Soybean	cytosol	36.94	45.62
KRH72422	Soybean	cytosol	36.19	44.7
Zm00001d022546_P001	Maize	plastid	64.18	43.22
KXG37006	Sorghum	cytosol	64.55	41.79
KRH48828	Soybean	cytosol	4.48	23.53
KRH73482	Soybean	cytosol	7.09	12.75
KRH64911	Soybean	cytosol	7.09	12.75
KRH57715	Soybean	cytosol	7.09	12.75
KRH14671	Soybean	cytosol	7.09	12.75
KRG94210	Soybean	nucleus	7.09	12.75
KRH69648	Soybean	cytosol	5.97	10.0
KRH69644	Soybean	cytosol	5.97	7.08

Protein Annotations

EMBL:ACUP02012067	EnsemblPlants:KRG94970	EnsemblPlantsGene:GLYMA_19G121600	EntrezGene:100780431	Gene3D:3.40.50.1820	InterPro:AB_hydrolase
InterPro:FSH_dom	InterPro:IPR029058	PANTHER:PTHR22778	PANTHER:PTHR22778:SF22	PFAM:PF03959	ProteinID:KRG94970
ProteinID:KRG94970.1	SUPFAM:SSF53474	UniParc:UPI0001BA8AF3	UniProt:I1N8I3	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr19:-:37987312..37989378

Molecular Weight (calculated)

30235.1 Da

IEP (calculated)

5.435

GRAVY (calculated)

-0.361

Length

268 amino acids

Sequence
(BLAST)

001: MEGENGKKLK ILCLHGFRTS GSFLKKQISK WDPSLFIQFD MVFPDGKYPA GGKSDIEGIF PPPYYEWFQF EKDFTVYFNL EECISYLCDY ITANGPFDGF
101: LGFSQGATLS ALLIGYQAQG KVLKEHPPIK FFISISGSKF RDPSICDVAY KDPIKAKSVH FIGEKDWLKL PSEDLASAFD KPFIIRHPQG HTVPRLDEVA
201: ISQLRKWITE EVLCQPKVEV SVCERETDHE EKMSEKTTKI EPCGTNQDKG VNGVEINKGS ETVEVAQA

Best Arabidopsis Sequence Match ( AT4G24380.1 )
(BLAST)

001: MGSEGRSIAR KPRFLCLHGF RTSGEIMKIQ LHKWPKSVID RLDLVFLDAP FPCQGKSDVE GIFDPPYYEW FQFNKEFTEY TNFEKCLEYL EDRMIKLGPF
101: DGLIGFSQGA ILSGGLPGLQ AKGIAFQKVP KIKFVIIIGG AKLKSAKLAE NAYSSSLETL SLHFLGETDF LKPYGTQLIE SYKNPVVVHH PKGHTVPRLD
201: EKSLEKVTAF IDTLEHLVME EDKNGEENTS KPTK

Arabidopsis Description

INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BE /.../bidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G24380]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.