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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • golgi 1
  • extracellular 1
  • nucleus 1
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, extracellular, golgi, mitochondrion, nucleus
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol, extracellular, golgi, nucleus
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G098200.1 Wheat cytosol 83.4 83.4
TraesCS2B01G113900.1 Wheat cytosol 83.0 83.0
TraesCS2D01G097600.1 Wheat cytosol 82.59 82.59
Zm00001d007196_P001 Maize cytosol 76.92 77.87
GSMUA_Achr10P... Banana mitochondrion 70.45 71.9
PGSC0003DMT400035884 Potato mitochondrion 64.78 64.52
VIT_08s0040g00440.t01 Wine grape mitochondrion 66.8 63.22
KRG94970 Soybean cytosol 68.42 63.06
KRH64918 Soybean cytosol 67.21 61.94
Solyc06g060570.2.1 Tomato cytosol 62.35 59.92
Zm00001d022546_P001 Maize plastid 80.97 50.25
KXG37006 Sorghum cytosol 81.78 48.79
Os04t0450100-01 Rice cytosol 43.32 43.67
VIT_11s0016g04330.t01 Wine grape cytosol, mitochondrion, nucleus 25.51 41.18
Protein Annotations
EMBL:AK066780EnsemblPlants:Os07t0687100-01EnsemblPlantsGene:Os07g0687100Gene3D:3.40.50.1820InterPro:AB_hydrolaseInterPro:FSH_dom
InterPro:IPR029058PANTHER:PTHR22778PANTHER:PTHR22778:SF22PFAM:PF03959ProteinID:BAC10351.1ProteinID:BAD30292.1
ProteinID:BAT03300.1ProteinID:EEE67847.1SUPFAM:SSF53474UniParc:UPI00000A9227UniProt:Q8LIG3MapMan:35.2
Description
Protein of unknown function DUF341 family protein. (Os07t0687100-01);Protein of unknown function DUF341 domain containing protein. (Os07t0687100-02)
Coordinates
chr7:-:29195160..29197462
Molecular Weight (calculated)
27561.8 Da
IEP (calculated)
4.881
GRAVY (calculated)
-0.214
Length
247 amino acids
Sequence
(BLAST)
001: MELDKKFKVL CLHGFRTSGS FLKKQISKWN PSIFQQFDMV FPDGIFPAGG KSEIEGIFPP PYFEWFQFNK DFTEYTNLDE CISYLCDYMV KNGPFDGLLG
101: FSQGATLSAL LIGYQAQGKV LNDHPPIKFM VSIAGSKFRD PSICNVAYKD PIKVKSVHFI GEKDWLKVPS EELAAAFEDP VIIRHPQGHT VPRLDEASVK
201: QLSEWSSSIL EDIKNADDVA KASIVEKPSE GNTVAESGEN LVEQIAA
Best Arabidopsis Sequence Match ( AT4G24380.1 )
(BLAST)
001: MGSEGRSIAR KPRFLCLHGF RTSGEIMKIQ LHKWPKSVID RLDLVFLDAP FPCQGKSDVE GIFDPPYYEW FQFNKEFTEY TNFEKCLEYL EDRMIKLGPF
101: DGLIGFSQGA ILSGGLPGLQ AKGIAFQKVP KIKFVIIIGG AKLKSAKLAE NAYSSSLETL SLHFLGETDF LKPYGTQLIE SYKNPVVVHH PKGHTVPRLD
201: EKSLEKVTAF IDTLEHLVME EDKNGEENTS KPTK
Arabidopsis Description
INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BE /.../bidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G24380]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.