CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007196_P001	Maize	cytosol	52.66	89.34
Zm00001d022546_P001	Maize	plastid	81.16	84.42
Os07t0687100-01	Rice	cytosol	48.79	81.78
TraesCS2A01G098200.1	Wheat	cytosol	48.31	80.97
TraesCS2B01G113900.1	Wheat	cytosol	48.07	80.57
TraesCS2D01G097600.1	Wheat	cytosol	47.58	79.76
GSMUA_Achr10P...	Banana	mitochondrion	42.27	72.31
KRG94970	Soybean	cytosol	41.79	64.55
VIT_08s0040g00440.t01	Wine grape	mitochondrion	40.1	63.6
KRH64918	Soybean	cytosol	41.06	63.43
PGSC0003DMT400035884	Potato	mitochondrion	37.2	62.1
Solyc06g060570.2.1	Tomato	cytosol	35.75	57.59
VIT_11s0016g04330.t01	Wine grape	cytosol, mitochondrion, nucleus	15.22	41.18
KXG26427	Sorghum	cytosol	24.88	40.71
EER94946	Sorghum	cytosol	4.59	12.75
OQU86675	Sorghum	cytosol	4.59	12.75
EES19728	Sorghum	cytosol	4.59	12.75

Protein Annotations

Gene3D:1.10.238.10	Gene3D:3.40.50.1820	MapMan:35.1	UniProt:A0A1B6QGF6	InterPro:AB_hydrolase	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FSH_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:IPR002048	InterPro:IPR029058	EnsemblPlants:KXG37006	ProteinID:KXG37006	ProteinID:KXG37006.2	PFAM:PF03959
PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR22778	PANTHER:PTHR22778:SF22	SMART:SM00054
EnsemblPlantsGene:SORBI_3002G424350	SUPFAM:SSF47473	SUPFAM:SSF53474	UniParc:UPI0001A836E4	RefSeq:XP_002461247.1	:

Description

hypothetical protein

Coordinates

chr2:+:77126754..77131185

Molecular Weight (calculated)

46228.5 Da

IEP (calculated)

4.281

GRAVY (calculated)

-0.416

Length

414 amino acids

Sequence
(BLAST)

001: MADQLTDDQI AEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAKV ELMEQGKRAK VLCLHGFRTS GSFLKKQISK WHPSIFQQFE MVFPDGIFPA
201: GGKSEIEGIF PPPYFEWFQF NKEFTEYTNL DECISYLCDY MVKNGPFDGL LGFSQGATLS ALLIGYQAQG KVLSDHPPIK FMVSISGSKF RDPSICDVAY
301: KDPIKVKSVH FIGEKDWLKV PSEELASAFD EPLIIRHPQG HTVPRLDDVS VKQLSEWSSC ILEDPKNANV PEALDSGKPS DKEATGAEFE ALDSGKPSDK
401: EATGAELAEN LVKA

Best Arabidopsis Sequence Match ( AT2G27030.3 )
(BLAST)

001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAKR RGKRVMAAKR SSNSAEYKEK NGRRKSHCRI L

Arabidopsis Description

CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.