Factsheet for Zm00001d007196_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G098200.1	Wheat	cytosol	79.1	78.14
TraesCS2B01G113900.1	Wheat	cytosol	78.69	77.73
TraesCS2D01G097600.1	Wheat	cytosol	77.87	76.92
Os07t0687100-01	Rice	cytosol	77.87	76.92
GSMUA_Achr10P...	Banana	mitochondrion	67.62	68.18
KRG94970	Soybean	cytosol	66.39	60.45
VIT_08s0040g00440.t01	Wine grape	mitochondrion	64.34	60.15
KRH64918	Soybean	cytosol	65.98	60.07
PGSC0003DMT400035884	Potato	mitochondrion	59.43	58.47
Zm00001d022546_P001	Maize	plastid	88.93	54.52
Solyc06g060570.2.1	Tomato	cytosol	56.15	53.31
KXG37006	Sorghum	cytosol	89.34	52.66
Zm00001d003504_P002	Maize	plastid	40.57	41.42
VIT_11s0016g04330.t01	Wine grape	cytosol, mitochondrion, nucleus	24.59	39.22
Zm00001d003501_P001	Maize	plastid	39.34	32.0
Zm00001d010650_P001	Maize	cytosol	6.15	13.27
Zm00001d040323_P001	Maize	cytosol	6.15	13.27
Zm00001d007194_P001	Maize	cytosol	5.33	13.27

Protein Annotations

EnsemblPlants:Zm00001d007196_P001	EnsemblPlants:Zm00001d007196_T001	EnsemblPlantsGene:Zm00001d007196	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:FSH_dom
InterPro:IPR029058	PANTHER:PTHR22778	PANTHER:PTHR22778:SF22	PFAM:PF03959	ProteinID:ONM26288.1	SUPFAM:SSF53474
UniParc:UPI000221B416	UniProt:A0A1D6F4P0	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr2:+:224443694..224446766

Molecular Weight (calculated)

27312.6 Da

IEP (calculated)

4.692

GRAVY (calculated)

-0.153

Length

244 amino acids

Sequence
(BLAST)

001: MEQDKRTKVL CLHGFRTSGA FLKKQISKWH PSILQQFEMV FPDGVFPAGG KSEIEGIFPP PYFEWYQFNM EFTDYTNLDE CISYLCDYMV KNGPFDGLLG
101: FSQGATLLAL LVGYQAQGKV LSDHPPIKFV VSISGCKFKD PSICDVTYKD PIKVKSVHFI GEKDWLKVPS EELASAFDEP LIIRHPHGHT VPRLDDVSVK
201: QLSEWSSCIL EDLETAIVPE ALDSGNPSDK EAISAEFAEN LVTA

Best Arabidopsis Sequence Match ( AT4G24380.1 )
(BLAST)

001: MGSEGRSIAR KPRFLCLHGF RTSGEIMKIQ LHKWPKSVID RLDLVFLDAP FPCQGKSDVE GIFDPPYYEW FQFNKEFTEY TNFEKCLEYL EDRMIKLGPF
101: DGLIGFSQGA ILSGGLPGLQ AKGIAFQKVP KIKFVIIIGG AKLKSAKLAE NAYSSSLETL SLHFLGETDF LKPYGTQLIE SYKNPVVVHH PKGHTVPRLD
201: EKSLEKVTAF IDTLEHLVME EDKNGEENTS KPTK

Arabidopsis Description

INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BE /.../bidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G24380]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.