Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0040g00440.t01 | Wine grape | mitochondrion | 87.58 | 51.34 |
| Os07t0687100-01 | Rice | cytosol | 41.18 | 25.51 |
| TraesCS2A01G098200.1 | Wheat | cytosol | 40.52 | 25.1 |
| TraesCS2B01G113900.1 | Wheat | cytosol | 40.52 | 25.1 |
| TraesCS2D01G097600.1 | Wheat | cytosol | 39.87 | 24.7 |
| Zm00001d007196_P001 | Maize | cytosol | 39.22 | 24.59 |
| KXG37006 | Sorghum | cytosol | 41.18 | 15.22 |
| Zm00001d022546_P001 | Maize | plastid | 39.22 | 15.08 |
| VIT_18s0001g07090.t01 | Wine grape | mitochondrion | 20.91 | 14.16 |
| VIT_00s0199g00270.t01 | Wine grape | cytosol, mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| EntrezGene:100264701 | wikigene:100264701 | EntrezGene:109123406 | Gene3D:3.40.50.1820 | MapMan:35.2 | InterPro:AB_hydrolase |
| ProteinID:CCB51540 | ProteinID:CCB51540.1 | ncoils:Coil | UniProt:F6HH44 | EMBL:FN595756 | InterPro:FSH_dom |
| InterPro:IPR029058 | EntrezGene:LOC100264701 | wikigene:LOC100264701 | PFAM:PF03959 | PANTHER:PTHR22778 | PANTHER:PTHR22778:SF22 |
| UniParc:UPI00015C8719 | ArrayExpress:VIT_11s0016g04330 | EnsemblPlantsGene:VIT_11s0016g04330 | EnsemblPlants:VIT_11s0016g04330.t01 | RefSeq:XP_002284742 | RefSeq:XP_002284742.1 |
| RefSeq:XP_019078543.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:3616755..3617559
Molecular Weight (calculated)
16929.1 Da
IEP (calculated)
6.512
GRAVY (calculated)
-0.658
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLFISISGS KFRDPSICDV AYKDPIKVRS VHFIGAKDWL RLPSEDLATA FDNPLIIRHP QGHTIPRLDE AATEQLRSCS TEILLHQSNN PSVNKHNLEN
101: GEVKADEAQM ENGEVKAEEH KGKVEKACKT QKPEGVIEKK MENGAGGLEA TQA
101: GEVKADEAQM ENGEVKAEEH KGKVEKACKT QKPEGVIEKK MENGAGGLEA TQA
001: MHLFLVKANL MSKASLILLI TSGFNSTRSF VFLHFLLFIL LIRMCTNVVI WIQEFTEYTN FEKCLEYLED RMIKLGPFDG LIGFSQGAIL SGGLPGLQAK
101: GIAFQKVPKI KFVIIIGGAK LKSAKLAENA YSSSLETLSL HFLGETDFLK PYGTQLIESY KNPVVVHHPK GHTVPRLDEK SLEKVTAFID TLEHLVMEED
201: KNGEENTSKP TK
101: GIAFQKVPKI KFVIIIGGAK LKSAKLAENA YSSSLETLSL HFLGETDFLK PYGTQLIESY KNPVVVHHPK GHTVPRLDEK SLEKVTAFID TLEHLVMEED
201: KNGEENTSKP TK
Arabidopsis Description
INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BE /.../bidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G24380]
SUBAcon: [mitochondrion,endoplasmic reticulum,extracellular]
SUBAcon: [mitochondrion,endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.