Factsheet for Zm00001d003501_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G318000.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	28.67	67.19
Zm00001d003504_P002	Maize	plastid	46.33	58.16
GSMUA_Achr10P...	Banana	cytosol	45.0	56.02
GSMUA_Achr7P12840_001	Banana	mitochondrion	42.0	52.94
HORVU2Hr1G078990.11	Barley	cytosol, peroxisome	39.33	52.44
GSMUA_Achr3P06720_001	Banana	cytosol	42.0	51.85
VIT_18s0001g07090.t01	Wine grape	mitochondrion	38.67	51.33
KRH16812	Soybean	cytosol	36.67	50.69
KRH72422	Soybean	cytosol	36.67	50.69
Solyc04g074950.2.1	Tomato	cytosol, mitochondrion, nucleus	36.33	48.88
TraesCS2B01G336100.2	Wheat	mitochondrion, plastid	27.0	47.93
Bra013797.1-P	Field mustard	cytosol	36.0	46.96
CDY03451	Canola	cytosol	36.0	46.96
CDY34285	Canola	cytosol	36.0	46.96
CDY08935	Canola	cytosol, mitochondrion	36.33	46.38
CDY24838	Canola	mitochondrion	36.33	46.38
Bra010491.1-P	Field mustard	cytosol	31.33	44.98
Solyc04g074960.2.1	Tomato	cytosol, mitochondrion, plastid	36.67	42.8
AT4G24380.3	Thale cress	mitochondrion	35.0	40.23
Zm00001d007196_P001	Maize	cytosol	32.0	39.34
KRH48828	Soybean	cytosol	5.33	31.37
Zm00001d022546_P001	Maize	plastid	33.67	25.38
Zm00001d010650_P001	Maize	cytosol	7.33	19.47
Zm00001d040323_P001	Maize	cytosol	7.33	19.47
Zm00001d007194_P001	Maize	cytosol	6.33	19.39

Protein Annotations

EnsemblPlants:Zm00001d003501_P001	EnsemblPlants:Zm00001d003501_T001	EnsemblPlantsGene:Zm00001d003501	EntrezGene:103646379	Gene3D:3.40.50.1820	InterPro:AB_hydrolase
InterPro:FSH_dom	InterPro:IPR029058	PANTHER:PTHR22778	PANTHER:PTHR22778:SF25	PFAM:PF03959	ProteinID:ONM17056.1
SEG:seg	SUPFAM:SSF53474	UniParc:UPI000220F51D	UniProt:A0A1D6E9I3	MapMan:35.2	:

Description

No Description!

Coordinates

chr2:-:46132324..46134141

Molecular Weight (calculated)

32653.1 Da

IEP (calculated)

7.397

GRAVY (calculated)

-0.135

Length

300 amino acids

Sequence
(BLAST)

001: MEVAGRCQLR QLVSSKAPSA LGPRSTLPRR LATFAAASSC SCSCPLRDGN RRAHGVRASE STDTDAPAFG PPRPRRPPRF LCLHGFRTSG EIMRRQVVGR
101: WAPEVTARLD LVFADGPFPA EGASPVAGAF DPPYYEWCQF VGEDFLSCRN LDRCFSYLEE LMAREGPFDG LLGFSQGAGL SAVLAGLQEQ GLALTGVAQV
201: KCVIVIAGAK IRAPAAVARA FDTKITCPSL HFIGEEDFVK VHSEELVRAF ADPLVIRHPR GHTVPKLDEK GLQTMLTYLD KIEREIWEHS STDAEIVGSN

Best Arabidopsis Sequence Match ( AT4G24380.1 )
(BLAST)

001: MGSEGRSIAR KPRFLCLHGF RTSGEIMKIQ LHKWPKSVID RLDLVFLDAP FPCQGKSDVE GIFDPPYYEW FQFNKEFTEY TNFEKCLEYL EDRMIKLGPF
101: DGLIGFSQGA ILSGGLPGLQ AKGIAFQKVP KIKFVIIIGG AKLKSAKLAE NAYSSSLETL SLHFLGETDF LKPYGTQLIE SYKNPVVVHH PKGHTVPRLD
201: EKSLEKVTAF IDTLEHLVME EDKNGEENTS KPTK

Arabidopsis Description

INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BE /.../bidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G24380]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.