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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra010491.1-P Field mustard cytosol 88.94 100.0
CDY08935 Canola cytosol, mitochondrion 99.57 99.57
CDY03451 Canola cytosol 81.28 83.04
CDY34285 Canola cytosol 80.85 82.61
AT4G24380.3 Thale cress mitochondrion 79.57 71.65
KRH72422 Soybean cytosol 62.13 67.28
KRH16812 Soybean cytosol 62.13 67.28
VIT_18s0001g07090.t01 Wine grape mitochondrion 63.4 65.93
HORVU3Hr1G038300.1 Barley mitochondrion 19.57 63.01
Solyc04g074950.2.1 Tomato cytosol, mitochondrion, nucleus 58.72 61.88
HORVU3Hr1G056660.1 Barley mitochondrion 20.85 58.33
TraesCS2A01G317900.1 Wheat mitochondrion 60.0 58.26
TraesCS2B01G336000.1 Wheat mitochondrion 60.43 58.2
Zm00001d003504_P002 Maize plastid 59.15 58.16
TraesCS2D01G315600.1 Wheat mitochondrion 60.0 57.79
Os04t0450100-01 Rice cytosol 60.0 57.55
GSMUA_Achr7P12840_001 Banana mitochondrion 57.45 56.72
GSMUA_Achr10P... Banana cytosol 57.87 56.43
KXG26427 Sorghum cytosol 59.15 54.94
HORVU2Hr1G079020.10 Barley cytosol 37.87 53.29
Solyc04g074960.2.1 Tomato cytosol, mitochondrion, plastid 57.45 52.53
GSMUA_Achr3P06720_001 Banana cytosol 52.77 51.03
HORVU2Hr1G026600.1 Barley mitochondrion 21.28 49.02
HORVU2Hr1G063400.1 Barley mitochondrion 21.28 49.02
TraesCS2A01G318000.1 Wheat endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 25.11 46.09
HORVU5Hr1G035170.1 Barley mitochondrion 20.0 46.08
HORVU7Hr1G079930.1 Barley mitochondrion 19.57 45.54
KRH48828 Soybean cytosol 9.79 45.1
CDY33961 Canola plastid 46.81 42.47
CDY37826 Canola plastid 46.38 41.92
HORVU3Hr1G056710.1 Barley mitochondrion 23.4 39.86
HORVU2Hr1G078990.11 Barley cytosol, peroxisome 36.6 38.22
TraesCS2B01G336100.2 Wheat mitochondrion, plastid 26.38 36.69
Zm00001d003501_P001 Maize plastid 46.38 36.33
CDX67656 Canola cytosol 10.21 16.11
CDX76012 Canola cytosol 10.21 16.11
CDY22503 Canola cytosol 10.21 16.11
CDY27197 Canola cytosol 10.21 16.11
CDY51259 Canola cytosol 10.21 16.11
CDY47377 Canola cytosol 10.21 16.11
CDY35428 Canola cytosol 10.21 16.11
CDX88824 Canola cytosol 9.79 15.44
CDY09106 Canola cytosol 9.79 15.44
CDX87950 Canola cytosol 9.79 15.44
CDY16599 Canola cytosol 9.79 15.44
CDX70966 Canola cytosol 9.79 15.44
Protein Annotations
EnsemblPlants:CDY24838EnsemblPlantsGene:GSBRNA2T00027316001Gene3D:3.40.50.1820InterPro:AB_hydrolaseInterPro:FSH_domInterPro:IPR029058
PANTHER:PTHR22778PANTHER:PTHR22778:SF25PFAM:PF03959ProteinID:CDY24838ProteinID:CDY24838.1SEG:seg
SUPFAM:SSF53474UniParc:UPI0004EDDCA8UniProt:A0A078GJQ5MapMan:35.2::
Description
BnaA08g14720DBnaA08g14720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJQ5]
Coordinates
chrLK032164:+:494444..495936
Molecular Weight (calculated)
26577.2 Da
IEP (calculated)
4.905
GRAVY (calculated)
-0.091
Length
235 amino acids
Sequence
(BLAST)
001: MGSQGGSIVR KPRFLCLHGF RTSAEIMKIQ LHKWPKAVID RLDLVFLDAP FPCQGKSDVD GIFDPPYYEW FQFNEEFIEY ENFENCLEYL EDRMIKLGPF
101: DGLIGFSQGG ILSGGLPGLQ AKGIALQKVP KIKFIIIIGG AMFRSTKVVE DAYSFSIDTP SLHFLGETDF LKPYGIKLIE SFKNPVVVHH PKGHIVPRID
201: EKSLEKVTAF LETIENLVMM EEEDKDGEEN ICSPI
Best Arabidopsis Sequence Match ( AT4G24380.1 )
(BLAST)
001: MGSEGRSIAR KPRFLCLHGF RTSGEIMKIQ LHKWPKSVID RLDLVFLDAP FPCQGKSDVE GIFDPPYYEW FQFNKEFTEY TNFEKCLEYL EDRMIKLGPF
101: DGLIGFSQGA ILSGGLPGLQ AKGIAFQKVP KIKFVIIIGG AKLKSAKLAE NAYSSSLETL SLHFLGETDF LKPYGTQLIE SYKNPVVVHH PKGHTVPRLD
201: EKSLEKVTAF IDTLEHLVME EDKNGEENTS KPTK
Arabidopsis Description
INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BE /.../bidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G24380]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.