Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34285 | Canola | cytosol | 72.8 | 82.61 |
| Bra013797.1-P | Field mustard | cytosol | 72.41 | 82.17 |
| CDY03451 | Canola | cytosol | 72.41 | 82.17 |
| CDY24838 | Canola | mitochondrion | 71.65 | 79.57 |
| CDY08935 | Canola | cytosol, mitochondrion | 71.26 | 79.15 |
| Bra010491.1-P | Field mustard | cytosol | 63.22 | 78.95 |
| KRH72422 | Soybean | cytosol | 57.85 | 69.59 |
| KRH16812 | Soybean | cytosol | 56.7 | 68.2 |
| VIT_18s0001g07090.t01 | Wine grape | mitochondrion | 59.0 | 68.14 |
| HORVU3Hr1G038300.1 | Barley | mitochondrion | 17.62 | 63.01 |
| Solyc04g074950.2.1 | Tomato | cytosol, mitochondrion, nucleus | 53.26 | 62.33 |
| TraesCS2A01G317900.1 | Wheat | mitochondrion | 54.41 | 58.68 |
| HORVU3Hr1G056660.1 | Barley | mitochondrion | 18.77 | 58.33 |
| TraesCS2B01G336000.1 | Wheat | mitochondrion | 54.41 | 58.2 |
| Os04t0450100-01 | Rice | cytosol | 54.41 | 57.96 |
| TraesCS2D01G315600.1 | Wheat | mitochondrion | 54.02 | 57.79 |
| GSMUA_Achr7P12840_001 | Banana | mitochondrion | 52.49 | 57.56 |
| Zm00001d003504_P002 | Maize | plastid | 52.49 | 57.32 |
| GSMUA_Achr10P... | Banana | cytosol | 51.34 | 55.6 |
| Solyc04g074960.2.1 | Tomato | cytosol, mitochondrion, plastid | 52.87 | 53.7 |
| KXG26427 | Sorghum | cytosol | 50.57 | 52.17 |
| HORVU2Hr1G079020.10 | Barley | cytosol | 33.33 | 52.1 |
| GSMUA_Achr3P06720_001 | Banana | cytosol | 46.74 | 50.21 |
| HORVU2Hr1G063400.1 | Barley | mitochondrion | 19.54 | 50.0 |
| HORVU2Hr1G026600.1 | Barley | mitochondrion | 19.54 | 50.0 |
| HORVU5Hr1G035170.1 | Barley | mitochondrion | 19.16 | 49.02 |
| TraesCS2A01G318000.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 23.75 | 48.44 |
| KRH48828 | Soybean | cytosol | 9.2 | 47.06 |
| HORVU7Hr1G079930.1 | Barley | mitochondrion | 17.62 | 45.54 |
| AT5G65400.2 | Thale cress | cytosol | 45.98 | 44.44 |
| HORVU3Hr1G056710.1 | Barley | mitochondrion | 21.07 | 39.86 |
| HORVU2Hr1G078990.11 | Barley | cytosol, peroxisome | 33.72 | 39.11 |
| TraesCS2B01G336100.2 | Wheat | mitochondrion, plastid | 24.9 | 38.46 |
| Zm00001d003501_P001 | Maize | plastid | 40.23 | 35.0 |
Protein Annotations
| ArrayExpress:AT4G24380 | EnsemblPlants:AT4G24380.3 | EnsemblPlantsGene:AT4G24380 | EntrezGene:828540 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase |
| InterPro:FSH_dom | InterPro:IPR029058 | PANTHER:PTHR22778 | PANTHER:PTHR22778:SF25 | PFAM:PF03959 | ProteinID:ANM67965.1 |
| RefSeq:AT4G24380 | RefSeq:AT4G24380-TAIR-G | RefSeq:NP_001329756.1 | TAIR:AT4G24380 | UniParc:UPI0008495861 | UniProt:A0A1P8B8P6 |
| MapMan:35.2 | : | : | : | : | : |
Description
INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BE /.../bidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G24380]
Coordinates
chr4:+:12612420..12613586
Molecular Weight (calculated)
29501.9 Da
IEP (calculated)
8.005
GRAVY (calculated)
-0.193
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSEGRSIAR KPRFLCLHGF RTSGEIMKIQ LHKWPKSVID RLDLVFLDAP FPCQGKSDVE GIFDPPYYEW FQFNKEFTEY TNFEKCLEYL EDRMIKLGPF
101: DGLIGFSQVS YLHLKLHQQS LICVLSLKTL NLILQGAILS GGLPGLQAKG IAFQKVPKIK FVIIIGGAKL KSAKLAENAY SSSLETLSLH FLGETDFLKP
201: YGTQLIESYK NPVVVHHPKG HTVPRLDEKS LEKVTAFIDT LEHLVMEEDK NGEENTSKPT K
101: DGLIGFSQVS YLHLKLHQQS LICVLSLKTL NLILQGAILS GGLPGLQAKG IAFQKVPKIK FVIIIGGAKL KSAKLAENAY SSSLETLSLH FLGETDFLKP
201: YGTQLIESYK NPVVVHHPKG HTVPRLDEKS LEKVTAFIDT LEHLVMEEDK NGEENTSKPT K
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.