Factsheet for HORVU2Hr1G078990.11

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G318000.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.0	77.34
TraesCS2B01G336100.2	Wheat	mitochondrion, plastid	39.56	52.66
HORVU2Hr1G079020.10	Barley	cytosol	38.67	52.1
GSMUA_Achr7P12840_001	Banana	mitochondrion	48.0	45.38
GSMUA_Achr10P...	Banana	cytosol	48.44	45.23
VIT_18s0001g07090.t01	Wine grape	mitochondrion	44.0	43.81
KRH16812	Soybean	cytosol	41.78	43.32
KRH72422	Soybean	cytosol	41.33	42.86
Bra010491.1-P	Field mustard	cytosol	38.22	41.15
GSMUA_Achr3P06720_001	Banana	cytosol	43.11	39.92
Solyc04g074950.2.1	Tomato	cytosol, mitochondrion, nucleus	39.11	39.46
Zm00001d003501_P001	Maize	plastid	52.44	39.33
Bra013797.1-P	Field mustard	cytosol	39.56	38.7
CDY03451	Canola	cytosol	39.56	38.7
CDY34285	Canola	cytosol	39.56	38.7
CDY08935	Canola	cytosol, mitochondrion	38.67	37.02
CDY24838	Canola	mitochondrion	38.22	36.6
Solyc04g074960.2.1	Tomato	cytosol, mitochondrion, plastid	40.44	35.41
HORVU3Hr1G038300.1	Barley	mitochondrion	11.11	34.25
AT4G24380.3	Thale cress	mitochondrion	39.11	33.72
HORVU3Hr1G056660.1	Barley	mitochondrion	12.44	33.33
KRH48828	Soybean	cytosol	7.11	31.37
HORVU2Hr1G026600.1	Barley	mitochondrion	12.0	26.47
HORVU5Hr1G035170.1	Barley	mitochondrion	12.0	26.47
HORVU2Hr1G063400.1	Barley	mitochondrion	12.0	26.47
HORVU7Hr1G079930.1	Barley	mitochondrion	11.56	25.74
HORVU3Hr1G056710.1	Barley	mitochondrion	15.11	24.64
HORVU0Hr1G001270.1	Barley	cytosol	8.89	13.42
HORVU4Hr1G052210.2	Barley	cytosol	8.89	13.42
HORVU3Hr1G040040.1	Barley	cytosol	8.89	13.42

Protein Annotations

EnsemblPlants:HORVU2Hr1G078990.11	EnsemblPlantsGene:HORVU2Hr1G078990	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:FSH_dom	InterPro:IPR029058
PANTHER:PTHR22778	PANTHER:PTHR22778:SF25	PFAM:PF03959	SEG:seg	UniParc:UPI000B489582	UniProt:A0A287IKC0
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:572013570..572015370

Molecular Weight (calculated)

24954.0 Da

IEP (calculated)

6.505

GRAVY (calculated)

0.023

Length

225 amino acids

Sequence
(BLAST)

001: VTSRLDLAFA DAPFPAEGES PVRGVFDPPY YEWCRFVGED FLRYKNFGES LASIEELMVR EGPFDGLFGF SQQGALLSAA LVGLQEQGLA LNRVPRVKHV
101: VIISGAKIQA PALAAKAYAN KISCTSLHFI GDVDFVKAHG EELADSFVDP LVIRHPAGHT VPRFGKRDWP VNLEENIWVH CPTGLGTFRR SKTRLLTEFC
201: WLIFCFFGVL GICRREGSPN DAQLP

Best Arabidopsis Sequence Match ( AT4G24380.1 )
(BLAST)

001: MGSEGRSIAR KPRFLCLHGF RTSGEIMKIQ LHKWPKSVID RLDLVFLDAP FPCQGKSDVE GIFDPPYYEW FQFNKEFTEY TNFEKCLEYL EDRMIKLGPF
101: DGLIGFSQGA ILSGGLPGLQ AKGIAFQKVP KIKFVIIIGG AKLKSAKLAE NAYSSSLETL SLHFLGETDF LKPYGTQLIE SYKNPVVVHH PKGHTVPRLD
201: EKSLEKVTAF IDTLEHLVME EDKNGEENTS KPTK

Arabidopsis Description

INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BE /.../bidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G24380]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.