Factsheet for HORVU4Hr1G052210.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G178200.1	Wheat	cytosol, plastid, unclear	100.0	100.0
EER94946	Sorghum	cytosol	100.0	100.0
TraesCS4A01G126700.1	Wheat	cytosol	99.33	99.33
TraesCS4D01G179800.1	Wheat	cytosol	99.33	99.33
HORVU0Hr1G001270.1	Barley	cytosol	99.33	99.33
KRH14671	Soybean	cytosol	98.66	98.66
KRG94210	Soybean	nucleus	98.66	98.66
KRH57715	Soybean	cytosol	98.66	98.66
KRH64911	Soybean	cytosol	98.66	98.66
KRH73482	Soybean	cytosol	98.66	98.66
HORVU3Hr1G040040.1	Barley	cytosol	98.66	98.66
CDX67656	Canola	cytosol	98.66	98.66
CDY51259	Canola	cytosol	98.66	98.66
CDY47377	Canola	cytosol	98.66	98.66
CDY35428	Canola	cytosol	98.66	98.66
CDY27197	Canola	cytosol	98.66	98.66
CDY22503	Canola	cytosol	98.66	98.66
CDY16599	Canola	cytosol	98.66	98.66
CDY09106	Canola	cytosol	98.66	98.66
CDX88824	Canola	cytosol	98.66	98.66
CDX87950	Canola	cytosol	98.66	98.66
CDX76012	Canola	cytosol	98.66	98.66
CDX70966	Canola	cytosol	98.66	98.66
Zm00001d007194_P001	Maize	cytosol	62.42	94.9
Zm00001d010650_P001	Maize	cytosol	63.09	83.19
Zm00001d040323_P001	Maize	cytosol	62.42	82.3
HORVU3Hr1G056660.1	Barley	mitochondrion	7.38	13.1
HORVU5Hr1G035170.1	Barley	mitochondrion	8.72	12.75
HORVU3Hr1G038300.1	Barley	mitochondrion	6.04	12.33
HORVU7Hr1G079930.1	Barley	mitochondrion	8.05	11.88
HORVU2Hr1G063400.1	Barley	mitochondrion	8.05	11.76
HORVU2Hr1G026600.1	Barley	mitochondrion	8.05	11.76
HORVU3Hr1G056710.1	Barley	mitochondrion	9.4	10.14
HORVU2Hr1G078990.11	Barley	cytosol, peroxisome	13.42	8.89
HORVU2Hr1G079020.10	Barley	cytosol	8.72	7.78

Protein Annotations

EMBL:AK353793	EMBL:AK357660	EMBL:AK368424	EnsemblPlants:HORVU4Hr1G052210.2	EnsemblPlantsGene:HORVU4Hr1G052210	Gene3D:1.10.238.10
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
InterPro:IPR002048	PANTHER:PTHR23050	PANTHER:PTHR23050:SF250	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI00000013B8	UniProt:F2CQ91	MapMan:35.1	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CQ91]

Coordinates

chrchr4H:-:431749119..431750891

Molecular Weight (calculated)

16832.6 Da

IEP (calculated)

3.876

GRAVY (calculated)

-0.602

Length

149 amino acids

Sequence
(BLAST)

001: MADQLTDDQI AEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAK

Best Arabidopsis Sequence Match ( AT3G43810.1 )
(BLAST)

001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAK

Arabidopsis Description

CAM7Calmodulin 7 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPJ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.