Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G179800.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS4B01G178200.1 | Wheat | cytosol, plastid, unclear | 99.33 | 99.33 |
| TraesCS2A01G098100.1 | Wheat | cytosol | 99.33 | 99.33 |
| HORVU4Hr1G052210.2 | Barley | cytosol | 99.33 | 99.33 |
| EER94946 | Sorghum | cytosol | 99.33 | 99.33 |
| CDX70966 | Canola | cytosol | 97.99 | 97.99 |
| KRH73482 | Soybean | cytosol | 97.99 | 97.99 |
| KRH64911 | Soybean | cytosol | 97.99 | 97.99 |
| KRH57715 | Soybean | cytosol | 97.99 | 97.99 |
| KRH14671 | Soybean | cytosol | 97.99 | 97.99 |
| KRG94210 | Soybean | nucleus | 97.99 | 97.99 |
| CDY47377 | Canola | cytosol | 97.99 | 97.99 |
| CDX67656 | Canola | cytosol | 97.99 | 97.99 |
| CDX76012 | Canola | cytosol | 97.99 | 97.99 |
| CDX87950 | Canola | cytosol | 97.99 | 97.99 |
| CDX88824 | Canola | cytosol | 97.99 | 97.99 |
| CDY09106 | Canola | cytosol | 97.99 | 97.99 |
| CDY16599 | Canola | cytosol | 97.99 | 97.99 |
| CDY22503 | Canola | cytosol | 97.99 | 97.99 |
| CDY27197 | Canola | cytosol | 97.99 | 97.99 |
| CDY35428 | Canola | cytosol | 97.99 | 97.99 |
| CDY51259 | Canola | cytosol | 97.99 | 97.99 |
| Zm00001d007194_P001 | Maize | cytosol | 61.74 | 93.88 |
| Zm00001d010650_P001 | Maize | cytosol | 62.42 | 82.3 |
| Zm00001d040323_P001 | Maize | cytosol | 61.74 | 81.42 |
| TraesCS2A01G317900.1 | Wheat | mitochondrion | 17.45 | 10.74 |
| TraesCS2A01G318000.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 6.71 | 7.81 |
| TraesCS2A01G098200.1 | Wheat | cytosol | 11.41 | 6.88 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G126700.1 | EnsemblPlantsGene:TraesCS4A01G126700 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF250 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 | TIGR:cd00051 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:163817143..163819110
Molecular Weight (calculated)
16818.6 Da
IEP (calculated)
3.871
GRAVY (calculated)
-0.602
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQLTDDQI AEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDD EVDEMIREAD VDGDGQINYE EFVKVMMAK
101: ISAAELRHVM TNLGEKLTDD EVDEMIREAD VDGDGQINYE EFVKVMMAK
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
Arabidopsis Description
CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.