Factsheet for TraesCS2A01G318000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	secretory
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G336100.2	Wheat	mitochondrion, plastid	82.81	62.72
HORVU2Hr1G078990.11	Barley	cytosol, peroxisome	77.34	44.0
KRH48828	Soybean	cytosol	15.62	39.22
GSMUA_Achr7P12840_001	Banana	mitochondrion	63.28	34.03
VIT_18s0001g07090.t01	Wine grape	mitochondrion	59.38	33.63
GSMUA_Achr10P...	Banana	cytosol	63.28	33.61
TraesCS2A01G317900.1	Wheat	mitochondrion	62.5	33.06
GSMUA_Achr3P06720_001	Banana	cytosol	58.59	30.86
KRH72422	Soybean	cytosol	50.78	29.95
KRH16812	Soybean	cytosol	50.78	29.95
Zm00001d003501_P001	Maize	plastid	67.19	28.67
Solyc04g074950.2.1	Tomato	cytosol, mitochondrion, nucleus	49.22	28.25
Bra010491.1-P	Field mustard	cytosol	46.09	28.23
CDY34285	Canola	cytosol	50.0	27.83
CDY03451	Canola	cytosol	50.0	27.83
Bra013797.1-P	Field mustard	cytosol	50.0	27.83
Solyc04g074960.2.1	Tomato	cytosol, mitochondrion, plastid	53.91	26.85
CDY24838	Canola	mitochondrion	46.09	25.11
CDY08935	Canola	cytosol, mitochondrion	46.09	25.11
TraesCS2A01G098200.1	Wheat	cytosol	48.44	25.1
AT4G24380.3	Thale cress	mitochondrion	48.44	23.75
TraesCS2A01G098100.1	Wheat	cytosol	7.81	6.71
TraesCS4A01G126700.1	Wheat	cytosol	7.81	6.71

Protein Annotations

EnsemblPlants:TraesCS2A01G318000.1	EnsemblPlantsGene:TraesCS2A01G318000	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:FSH_dom	InterPro:IPR029058
PANTHER:PTHR22778	PANTHER:PTHR22778:SF25	PFAM:PF03959	SEG:seg	SUPFAM:SSF53474	MapMan:35.2

Description

No Description!

Coordinates

chr2A:+:543189786..543190646

Molecular Weight (calculated)

13828.8 Da

IEP (calculated)

8.492

GRAVY (calculated)

0.056

Length

128 amino acids

Sequence
(BLAST)

001: MVRQGPFDGL FGFSQGALLS AALVGLQQQG LALNRVPRVK YVMIISGAKI QSPALAAKAY ANKINCASLH FIGDGDFVKA HGEELADSFV DPLVIRHPAG
101: HTVPRLDEKG LQAMLSYLDK IERDLARD

Best Arabidopsis Sequence Match ( AT4G24380.6 )
(BLAST)

001: MHLFLVKANL MSKASLILLI TSGFNSTRSF VFLHFLLFIL LIRMCTNVVI WIQEFTEYTN FEKCLEYLED RMIKLGPFDG LIGFSQGAIL SGGLPGLQAK
101: GIAFQKVPKI KFVIIIGGAK LKSAKLAENA YSSSLETLSL HFLGETDFLK PYGTQLIESY KNPVVVHHPK GHTVPRLDEK SLEKVTAFID TLEHLVMEED
201: KNGEENTSKP TK

Arabidopsis Description

INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BE /.../bidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G24380]
SUBAcon: [mitochondrion,endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.