Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- nucleus 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g074960.2.1 | Tomato | cytosol, mitochondrion, plastid | 82.51 | 71.6 |
| KRH72422 | Soybean | cytosol | 69.06 | 70.97 |
| KRH16812 | Soybean | cytosol | 68.16 | 70.05 |
| VIT_18s0001g07090.t01 | Wine grape | mitochondrion | 68.16 | 67.26 |
| Bra013797.1-P | Field mustard | cytosol | 63.23 | 61.3 |
| CDY03451 | Canola | cytosol | 63.23 | 61.3 |
| CDY34285 | Canola | cytosol | 63.23 | 61.3 |
| Bra010491.1-P | Field mustard | cytosol | 55.16 | 58.85 |
| CDY24838 | Canola | mitochondrion | 61.88 | 58.72 |
| CDY08935 | Canola | cytosol, mitochondrion | 61.44 | 58.3 |
| Zm00001d003504_P002 | Maize | plastid | 62.33 | 58.16 |
| Os04t0450100-01 | Rice | cytosol | 63.68 | 57.96 |
| HORVU3Hr1G038300.1 | Barley | mitochondrion | 18.83 | 57.53 |
| TraesCS2A01G317900.1 | Wheat | mitochondrion | 62.33 | 57.44 |
| TraesCS2D01G315600.1 | Wheat | mitochondrion | 62.33 | 56.97 |
| TraesCS2B01G336000.1 | Wheat | mitochondrion | 61.88 | 56.56 |
| GSMUA_Achr10P... | Banana | cytosol | 60.09 | 55.6 |
| GSMUA_Achr7P12840_001 | Banana | mitochondrion | 59.19 | 55.46 |
| HORVU3Hr1G056660.1 | Barley | mitochondrion | 20.63 | 54.76 |
| HORVU2Hr1G079020.10 | Barley | cytosol | 40.36 | 53.89 |
| AT4G24380.3 | Thale cress | mitochondrion | 62.33 | 53.26 |
| KRH48828 | Soybean | cytosol | 12.11 | 52.94 |
| KXG26427 | Sorghum | cytosol | 59.64 | 52.57 |
| GSMUA_Achr3P06720_001 | Banana | cytosol | 54.71 | 50.21 |
| TraesCS2A01G318000.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 28.25 | 49.22 |
| HORVU2Hr1G063400.1 | Barley | mitochondrion | 21.08 | 46.08 |
| HORVU2Hr1G026600.1 | Barley | mitochondrion | 21.08 | 46.08 |
| HORVU5Hr1G035170.1 | Barley | mitochondrion | 20.18 | 44.12 |
| HORVU7Hr1G079930.1 | Barley | mitochondrion | 19.28 | 42.57 |
| Solyc05g051430.2.1 | Tomato | cytosol, extracellular, peroxisome | 23.77 | 41.09 |
| HORVU2Hr1G078990.11 | Barley | cytosol, peroxisome | 39.46 | 39.11 |
| HORVU3Hr1G056710.1 | Barley | mitochondrion | 23.32 | 37.68 |
| TraesCS2B01G336100.2 | Wheat | mitochondrion, plastid | 28.25 | 37.28 |
| Solyc06g060570.2.1 | Tomato | cytosol | 42.6 | 36.97 |
| Zm00001d003501_P001 | Maize | plastid | 48.88 | 36.33 |
| Solyc11g010420.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 9.87 | 9.36 |
| Solyc11g010430.1.1 | Tomato | cytosol | 9.42 | 9.33 |
Protein Annotations
| EnsemblPlants:Solyc04g074950.2.1 | EnsemblPlantsGene:Solyc04g074950.2 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:FSH_dom | InterPro:IPR029058 |
| PANTHER:PTHR22778 | PANTHER:PTHR22778:SF25 | PFAM:PF03959 | SUPFAM:SSF53474 | UniParc:UPI000276586B | UniProt:K4BU33 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:+:60837124..60842010
Molecular Weight (calculated)
25232.3 Da
IEP (calculated)
6.625
GRAVY (calculated)
-0.310
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSVGDSKTH QRKPRFLCLH GFRTSGKILK KQIFDKWPTE VVDKLDLVFV DAPFPSQGKS EVEGIFDPPY YEWFQFNKEF TEYENFDKCL EYIEECMIKH
101: GPFDGLLGFS QGAILSGALS GLQAKEVGLT KASKIKYLII IGGAKFRNKS VAEKAYSPAI ACPSVHFLGE QDYLKQYGIE LLESCVDPVV IHHPRGHTIP
201: RFDEKGSESM LSFIEKVQEE INK
101: GPFDGLLGFS QGAILSGALS GLQAKEVGLT KASKIKYLII IGGAKFRNKS VAEKAYSPAI ACPSVHFLGE QDYLKQYGIE LLESCVDPVV IHHPRGHTIP
201: RFDEKGSESM LSFIEKVQEE INK
001: MGSEGRSIAR KPRFLCLHGF RTSGEIMKIQ LHKWPKSVID RLDLVFLDAP FPCQGKSDVE GIFDPPYYEW FQFNKEFTEY TNFEKCLEYL EDRMIKLGPF
101: DGLIGFSQGA ILSGGLPGLQ AKGIAFQKVP KIKFVIIIGG AKLKSAKLAE NAYSSSLETL SLHFLGETDF LKPYGTQLIE SYKNPVVVHH PKGHTVPRLD
201: EKSLEKVTAF IDTLEHLVME EDKNGEENTS KPTK
101: DGLIGFSQGA ILSGGLPGLQ AKGIAFQKVP KIKFVIIIGG AKLKSAKLAE NAYSSSLETL SLHFLGETDF LKPYGTQLIE SYKNPVVVHH PKGHTVPRLD
201: EKSLEKVTAF IDTLEHLVME EDKNGEENTS KPTK
Arabidopsis Description
INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BE /.../bidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G24380]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.