Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24838 | Canola | mitochondrion | 99.57 | 99.57 |
| CDY03451 | Canola | cytosol | 80.85 | 82.61 |
| CDY34285 | Canola | cytosol | 80.43 | 82.17 |
| AT4G24380.3 | Thale cress | mitochondrion | 79.15 | 71.26 |
| KRH16812 | Soybean | cytosol | 61.7 | 66.82 |
| KRH72422 | Soybean | cytosol | 61.7 | 66.82 |
| VIT_18s0001g07090.t01 | Wine grape | mitochondrion | 62.98 | 65.49 |
| HORVU3Hr1G038300.1 | Barley | mitochondrion | 19.15 | 61.64 |
| Solyc04g074950.2.1 | Tomato | cytosol, mitochondrion, nucleus | 58.3 | 61.44 |
| TraesCS2A01G317900.1 | Wheat | mitochondrion | 59.57 | 57.85 |
| TraesCS2B01G336000.1 | Wheat | mitochondrion | 60.0 | 57.79 |
| Zm00001d003504_P002 | Maize | plastid | 58.72 | 57.74 |
| TraesCS2D01G315600.1 | Wheat | mitochondrion | 59.57 | 57.38 |
| Os04t0450100-01 | Rice | cytosol | 59.57 | 57.14 |
| HORVU3Hr1G056660.1 | Barley | mitochondrion | 20.43 | 57.14 |
| GSMUA_Achr7P12840_001 | Banana | mitochondrion | 57.02 | 56.3 |
| GSMUA_Achr10P... | Banana | cytosol | 57.45 | 56.02 |
| KXG26427 | Sorghum | cytosol | 58.72 | 54.55 |
| HORVU2Hr1G079020.10 | Barley | cytosol | 37.87 | 53.29 |
| Solyc04g074960.2.1 | Tomato | cytosol, mitochondrion, plastid | 57.02 | 52.14 |
| GSMUA_Achr3P06720_001 | Banana | cytosol | 52.34 | 50.62 |
| HORVU2Hr1G063400.1 | Barley | mitochondrion | 20.85 | 48.04 |
| HORVU2Hr1G026600.1 | Barley | mitochondrion | 20.85 | 48.04 |
| HORVU5Hr1G035170.1 | Barley | mitochondrion | 20.43 | 47.06 |
| TraesCS2A01G318000.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 25.11 | 46.09 |
| KRH48828 | Soybean | cytosol | 9.79 | 45.1 |
| HORVU7Hr1G079930.1 | Barley | mitochondrion | 19.15 | 44.55 |
| CDY33961 | Canola | plastid | 46.81 | 42.47 |
| CDY37826 | Canola | plastid | 46.38 | 41.92 |
| HORVU3Hr1G056710.1 | Barley | mitochondrion | 22.98 | 39.13 |
| HORVU2Hr1G078990.11 | Barley | cytosol, peroxisome | 37.02 | 38.67 |
| TraesCS2B01G336100.2 | Wheat | mitochondrion, plastid | 26.38 | 36.69 |
| Zm00001d003501_P001 | Maize | plastid | 46.38 | 36.33 |
| CDX67656 | Canola | cytosol | 10.21 | 16.11 |
| CDX76012 | Canola | cytosol | 10.21 | 16.11 |
| CDY22503 | Canola | cytosol | 10.21 | 16.11 |
| CDY27197 | Canola | cytosol | 10.21 | 16.11 |
| CDY35428 | Canola | cytosol | 10.21 | 16.11 |
| CDY47377 | Canola | cytosol | 10.21 | 16.11 |
| CDY51259 | Canola | cytosol | 10.21 | 16.11 |
| CDY16599 | Canola | cytosol | 9.79 | 15.44 |
| CDY09106 | Canola | cytosol | 9.79 | 15.44 |
| CDX88824 | Canola | cytosol | 9.79 | 15.44 |
| CDX87950 | Canola | cytosol | 9.79 | 15.44 |
| CDX70966 | Canola | cytosol | 9.79 | 15.44 |
Protein Annotations
| EnsemblPlants:CDY08935 | EnsemblPlantsGene:GSBRNA2T00000966001 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:FSH_dom | InterPro:IPR029058 |
| PANTHER:PTHR22778 | PANTHER:PTHR22778:SF25 | PFAM:PF03959 | ProteinID:CDY08935 | ProteinID:CDY08935.1 | SEG:seg |
| SUPFAM:SSF53474 | UniParc:UPI0004EC4299 | UniProt:A0A078F333 | MapMan:35.2 | : | : |
Description
BnaC08g11650DBnaC08g11650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F333]
Coordinates
chrLK031990:+:574415..575955
Molecular Weight (calculated)
26563.2 Da
IEP (calculated)
4.905
GRAVY (calculated)
-0.092
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSQGGSIVR KPRFLCLHGF RTSAEIMKIQ LHKWPKAVID RLDLVFLDAP FPCQGKSDVD GVFDPPYYEW FQFNEEFIEY ENFENCLEYL EDRMIKLGPF
101: DGLIGFSQGG ILSGGLPGLQ AKGIALQKVP KIKFIIIIGG AMFRSTKVVE DAYSFSIDTP SLHFLGETDF LKPYGIKLIE SFKNPVVVHH PKGHIVPRID
201: EKSLEKVTAF LETIENLVMM EEEDKDGEEN ICSPI
101: DGLIGFSQGG ILSGGLPGLQ AKGIALQKVP KIKFIIIIGG AMFRSTKVVE DAYSFSIDTP SLHFLGETDF LKPYGIKLIE SFKNPVVVHH PKGHIVPRID
201: EKSLEKVTAF LETIENLVMM EEEDKDGEEN ICSPI
001: MGSEGRSIAR KPRFLCLHGF RTSGEIMKIQ LHKWPKSVID RLDLVFLDAP FPCQGKSDVE GIFDPPYYEW FQFNKEFTEY TNFEKCLEYL EDRMIKLGPF
101: DGLIGFSQGA ILSGGLPGLQ AKGIAFQKVP KIKFVIIIGG AKLKSAKLAE NAYSSSLETL SLHFLGETDF LKPYGTQLIE SYKNPVVVHH PKGHTVPRLD
201: EKSLEKVTAF IDTLEHLVME EDKNGEENTS KPTK
101: DGLIGFSQGA ILSGGLPGLQ AKGIAFQKVP KIKFVIIIGG AKLKSAKLAE NAYSSSLETL SLHFLGETDF LKPYGTQLIE SYKNPVVVHH PKGHTVPRLD
201: EKSLEKVTAF IDTLEHLVME EDKNGEENTS KPTK
Arabidopsis Description
INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BE /.../bidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G24380]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.