Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013797.1-P | Field mustard | cytosol | 99.13 | 99.13 |
| CDY34285 | Canola | cytosol | 98.7 | 98.7 |
| CDY24838 | Canola | mitochondrion | 83.04 | 81.28 |
| CDY08935 | Canola | cytosol, mitochondrion | 82.61 | 80.85 |
| AT4G24380.3 | Thale cress | mitochondrion | 82.17 | 72.41 |
| KRH72422 | Soybean | cytosol | 64.78 | 68.66 |
| KRH16812 | Soybean | cytosol | 64.35 | 68.2 |
| VIT_18s0001g07090.t01 | Wine grape | mitochondrion | 64.35 | 65.49 |
| Solyc04g074950.2.1 | Tomato | cytosol, mitochondrion, nucleus | 61.3 | 63.23 |
| HORVU3Hr1G038300.1 | Barley | mitochondrion | 19.57 | 61.64 |
| GSMUA_Achr7P12840_001 | Banana | mitochondrion | 60.43 | 58.4 |
| TraesCS2A01G317900.1 | Wheat | mitochondrion | 61.3 | 58.26 |
| TraesCS2B01G336000.1 | Wheat | mitochondrion | 61.3 | 57.79 |
| TraesCS2D01G315600.1 | Wheat | mitochondrion | 60.87 | 57.38 |
| GSMUA_Achr10P... | Banana | cytosol | 60.0 | 57.26 |
| HORVU3Hr1G056660.1 | Barley | mitochondrion | 20.87 | 57.14 |
| Os04t0450100-01 | Rice | cytosol | 60.87 | 57.14 |
| Zm00001d003504_P002 | Maize | plastid | 59.13 | 56.9 |
| Solyc04g074960.2.1 | Tomato | cytosol, mitochondrion, plastid | 59.57 | 53.31 |
| HORVU2Hr1G079020.10 | Barley | cytosol | 38.26 | 52.69 |
| KXG26427 | Sorghum | cytosol | 57.39 | 52.17 |
| GSMUA_Achr3P06720_001 | Banana | cytosol | 54.78 | 51.85 |
| TraesCS2A01G318000.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 27.83 | 50.0 |
| HORVU2Hr1G026600.1 | Barley | mitochondrion | 21.74 | 49.02 |
| HORVU2Hr1G063400.1 | Barley | mitochondrion | 21.74 | 49.02 |
| HORVU5Hr1G035170.1 | Barley | mitochondrion | 20.43 | 46.08 |
| KRH48828 | Soybean | cytosol | 10.0 | 45.1 |
| CDY37826 | Canola | plastid | 50.87 | 45.0 |
| HORVU7Hr1G079930.1 | Barley | mitochondrion | 19.57 | 44.55 |
| CDY33961 | Canola | plastid | 49.57 | 44.02 |
| HORVU3Hr1G056710.1 | Barley | mitochondrion | 24.35 | 40.58 |
| TraesCS2B01G336100.2 | Wheat | mitochondrion, plastid | 29.13 | 39.65 |
| HORVU2Hr1G078990.11 | Barley | cytosol, peroxisome | 38.7 | 39.56 |
| Zm00001d003501_P001 | Maize | plastid | 46.96 | 36.0 |
| CDX70966 | Canola | cytosol | 10.87 | 16.78 |
| CDY16599 | Canola | cytosol | 10.87 | 16.78 |
| CDY09106 | Canola | cytosol | 10.87 | 16.78 |
| CDX88824 | Canola | cytosol | 10.87 | 16.78 |
| CDX87950 | Canola | cytosol | 10.87 | 16.78 |
| CDX76012 | Canola | cytosol | 10.43 | 16.11 |
| CDY51259 | Canola | cytosol | 10.43 | 16.11 |
| CDX67656 | Canola | cytosol | 10.43 | 16.11 |
| CDY22503 | Canola | cytosol | 10.43 | 16.11 |
| CDY27197 | Canola | cytosol | 10.43 | 16.11 |
| CDY35428 | Canola | cytosol | 10.43 | 16.11 |
| CDY47377 | Canola | cytosol | 10.43 | 16.11 |
Protein Annotations
| EnsemblPlants:CDY03451 | EnsemblPlantsGene:GSBRNA2T00116105001 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:FSH_dom | InterPro:IPR029058 |
| PANTHER:PTHR22778 | PANTHER:PTHR22778:SF25 | PFAM:PF03959 | ProteinID:CDY03451 | ProteinID:CDY03451.1 | SUPFAM:SSF53474 |
| UniParc:UPI0004EBC462 | MapMan:35.2 | : | : | : | : |
Description
BnaC01g16310D
Coordinates
chrLK031943:-:534340..535600
Molecular Weight (calculated)
26018.5 Da
IEP (calculated)
4.887
GRAVY (calculated)
-0.102
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSEGTIVRK PRFLCLHGFR TSGEIMKIQL HKWPQSVIDR LDLVFLDAPF PCQGKSDVEG IFDPPYYEWF QFNKEFNEYT NFEKCLEYLE DRMIELGPFD
101: GLIGFSQGAI LSGGLPGLQA KGIALQKVPK IKFIIIIGGA MFKSTNVAKD AYSSTMDIPS LHFLGETDFL KPYGTELIDS FENPVVVHHP KGHTVPRLDE
201: KSLEKVTAFI DTLEHLLMEE EVKIGEDLIM
101: GLIGFSQGAI LSGGLPGLQA KGIALQKVPK IKFIIIIGGA MFKSTNVAKD AYSSTMDIPS LHFLGETDFL KPYGTELIDS FENPVVVHHP KGHTVPRLDE
201: KSLEKVTAFI DTLEHLLMEE EVKIGEDLIM
001: MGSEGRSIAR KPRFLCLHGF RTSGEIMKIQ LHKWPKSVID RLDLVFLDAP FPCQGKSDVE GIFDPPYYEW FQFNKEFTEY TNFEKCLEYL EDRMIKLGPF
101: DGLIGFSQGA ILSGGLPGLQ AKGIAFQKVP KIKFVIIIGG AKLKSAKLAE NAYSSSLETL SLHFLGETDF LKPYGTQLIE SYKNPVVVHH PKGHTVPRLD
201: EKSLEKVTAF IDTLEHLVME EDKNGEENTS KPTK
101: DGLIGFSQGA ILSGGLPGLQ AKGIAFQKVP KIKFVIIIGG AKLKSAKLAE NAYSSSLETL SLHFLGETDF LKPYGTQLIE SYKNPVVVHH PKGHTVPRLD
201: EKSLEKVTAF IDTLEHLVME EDKNGEENTS KPTK
Arabidopsis Description
INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BE /.../bidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G24380]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.