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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031860.1-P Field mustard mitochondrion 88.85 99.14
CDY33961 Canola plastid 92.31 92.66
AT5G65400.2 Thale cress cytosol 72.69 70.0
CDY34285 Canola cytosol 45.38 51.3
CDY03451 Canola cytosol 45.0 50.87
CDY08935 Canola cytosol, mitochondrion 41.92 46.38
CDY24838 Canola mitochondrion 41.92 46.38
CDY27197 Canola cytosol 8.08 14.09
CDY51259 Canola cytosol 8.08 14.09
CDY47377 Canola cytosol 8.08 14.09
CDY35428 Canola cytosol 8.08 14.09
CDY22503 Canola cytosol 8.08 14.09
CDX76012 Canola cytosol 8.08 14.09
CDX67656 Canola cytosol 8.08 14.09
CDY16599 Canola cytosol 7.69 13.42
CDY09106 Canola cytosol 7.69 13.42
CDX88824 Canola cytosol 7.69 13.42
CDX87950 Canola cytosol 7.69 13.42
CDX70966 Canola cytosol 7.69 13.42
VIT_00s0199g00270.t01 Wine grape cytosol, mitochondrion, nucleus 7.69 13.24
KRH69648 Soybean cytosol 8.08 13.12
PGSC0003DMT400041792 Potato cytosol 6.54 9.5
KRH69644 Soybean cytosol 8.08 9.29
Solyc11g010420.1.1 Tomato cytosol, peroxisome, plasma membrane 7.31 8.09
Solyc11g010430.1.1 Tomato cytosol 6.92 8.0
PGSC0003DMT400041791 Potato cytosol 6.92 7.83
Protein Annotations
EnsemblPlants:CDY37826EnsemblPlantsGene:GSBRNA2T00064770001Gene3D:3.40.50.1820InterPro:AB_hydrolaseInterPro:FSH_domInterPro:IPR029058
PANTHER:PTHR22778PANTHER:PTHR22778:SF25PFAM:PF03959ProteinID:CDY37826ProteinID:CDY37826.1SUPFAM:SSF53474
UniParc:UPI0004EF0AAEUniProt:A0A078HJH5MapMan:35.2:::
Description
BnaAnng04870DBnaAnng04870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJH5]
Coordinates
chrLK032409:+:70859..72250
Molecular Weight (calculated)
29301.3 Da
IEP (calculated)
7.898
GRAVY (calculated)
-0.218
Length
260 amino acids
Sequence
(BLAST)
001: MLSHSYPCCQ TASVSRPPRL AFKITTAMSS ETKQRNPRIL CLHGFRTSGL ILRSLITSKW PDTVLRNLDL DFLDGPFPAT GKSDIERFYD PPYYEWYQAS
101: KGFREYRNFE ECLDYVEDYM IKHGPFDGLL GFSQGAFLSA TLPGMQEQGK ALTKVPKVKF LVLISGGKIP GLRFGQPEAA VGAFSSPVRC PSLHFIGERD
201: FLKTEGEVLV ESFVEPVVIR HTSGHTIPKL EAEAEETVFS FFQRIRKMLS DEPSSVRSLM
Best Arabidopsis Sequence Match ( AT5G65400.1 )
(BLAST)
001: MLGYSYPCFQ TGLRLTTAMA PEIHLKPKNP RILCLHGFRT SGRILQAGIG KWPDTILRDL DLDFLDAPFP ATGKSDVERF FDPPYYEWYQ ANKGFKEYRN
101: FEECLAYIED YMIKNGPFDG LLGFSQGAFL TAAIPGMQEQ GSALTKVPKV KFLVIISGAK IPGLMFGEPK AAVNAFSSPV RCPSLHFIGE RDFLKIEGEV
201: LVESFVEPVV IHHSGGHIIP KLDTKAEETM LSFFQSIRQM LSDESGSVRS LM
Arabidopsis Description
alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G65400]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.