Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g010420.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 88.27 | 67.23 |
| KRH69648 | Soybean | cytosol | 59.78 | 66.88 |
| PGSC0003DMT400041791 | Potato | cytosol | 76.54 | 59.57 |
| KRH69644 | Soybean | cytosol | 61.45 | 48.67 |
| Bra031860.1-P | Field mustard | mitochondrion | 9.5 | 7.3 |
| CDY33961 | Canola | plastid | 9.5 | 6.56 |
| CDY37826 | Canola | plastid | 9.5 | 6.54 |
| PGSC0003DMT400035884 | Potato | mitochondrion | 7.26 | 5.24 |
| PGSC0003DMT400037790 | Potato | cytosol | 7.26 | 5.2 |
| AT5G65400.2 | Thale cress | cytosol | 7.82 | 5.19 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400041792 | EnsemblPlantsGene:PGSC0003DMG400016211 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:FSH_dom | InterPro:IPR029058 |
| PANTHER:PTHR22778 | PANTHER:PTHR22778:SF25 | PFAM:PF03959 | PGSC:PGSC0003DMG400016211 | SUPFAM:SSF53474 | UniParc:UPI000294F10E |
| UniProt:M1BC04 | MapMan:35.2 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400016211]
Coordinates
chr11:-:2481750..2483035
Molecular Weight (calculated)
20328.1 Da
IEP (calculated)
8.914
GRAVY (calculated)
0.180
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKESKRKPR ILCLHGYRES AEILKKLILR WPESVTGKLD LVFLDAPFPA KGKSRLEGFF DPPYFEWFRF NKDFTEFYNF EECLEYIEDF MSKHGPFDGI
101: LGFSMAAILC AAIPGMQREG VALKKVPKIK FVILISGAKF GGPSFGVPKL AINAFSSPIN CPSLHFLGTF ILSLFLIIF
101: LGFSMAAILC AAIPGMQREG VALKKVPKIK FVILISGAKF GGPSFGVPKL AINAFSSPIN CPSLHFLGTF ILSLFLIIF
001: MLGYSYPCFQ TGLRLTTAMA PEIHLKPKNP RILCLHGFRT SGRILQAGIG KWPDTILRDL DLDFLDAPFP ATGKSDVERF FDPPYYEWYQ ANKGFKEYRN
101: FEECLAYIED YMIKNGPFDG LLGFSQGAFL TAAIPGMQEQ GSALTKVPKV KFLVIISGAK IPGLMFGEPK AAVNAFSSPV RCPSLHFIGE RDFLKIEGEV
201: LVESFVEPVV IHHSGGHIIP KLDTKAEETM LSFFQSIRQM LSDESGSVRS LM
101: FEECLAYIED YMIKNGPFDG LLGFSQGAFL TAAIPGMQEQ GSALTKVPKV KFLVIISGAK IPGLMFGEPK AAVNAFSSPV RCPSLHFIGE RDFLKIEGEV
201: LVESFVEPVV IHHSGGHIIP KLDTKAEETM LSFFQSIRQM LSDESGSVRS LM
Arabidopsis Description
alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G65400]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.