Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 2
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031860.1-P | Field mustard | mitochondrion | 69.63 | 80.69 |
| CDY33961 | Canola | plastid | 71.11 | 74.13 |
| CDY37826 | Canola | plastid | 70.0 | 72.69 |
| AT4G24380.3 | Thale cress | mitochondrion | 44.44 | 45.98 |
| VIT_00s0199g00270.t01 | Wine grape | cytosol, mitochondrion, nucleus | 6.67 | 11.92 |
| KRH69648 | Soybean | cytosol | 6.67 | 11.25 |
| Solyc11g010420.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 7.04 | 8.09 |
| KRH69644 | Soybean | cytosol | 6.67 | 7.96 |
| PGSC0003DMT400041792 | Potato | cytosol | 5.19 | 7.82 |
| Solyc11g010430.1.1 | Tomato | cytosol | 6.3 | 7.56 |
| PGSC0003DMT400041791 | Potato | cytosol | 5.93 | 6.96 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:836665 | UniProt:A0A178UQA6 | UniProt:A0A1P8BCU7 | InterPro:AB_hydrolase |
| ProteinID:ANM69438.1 | ArrayExpress:AT5G65400 | EnsemblPlantsGene:AT5G65400 | RefSeq:AT5G65400 | TAIR:AT5G65400 | RefSeq:AT5G65400-TAIR-G |
| EnsemblPlants:AT5G65400.2 | Unigene:At.50558 | InterPro:FSH_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:IPR029058 | RefSeq:NP_001331116.1 | ProteinID:OAO95843.1 | PFAM:PF03959 | PANTHER:PTHR22778 | PANTHER:PTHR22778:SF25 |
| SUPFAM:SSF53474 | UniParc:UPI0007E290F7 | SEG:seg | : | : | : |
Description
alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G65400]
Coordinates
chr5:+:26131283..26133300
Molecular Weight (calculated)
30216.7 Da
IEP (calculated)
7.535
GRAVY (calculated)
-0.164
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGHKDNSKP EKRARACQML GYSYPCFQTG LRLTTAMAPE IHLKPKNPRI LCLHGFRTSG RILQAGIGKW PDTILRDLDL DFLDAPFPAT GKSDVERFFD
101: PPYYEWYQAN KGFKEYRNFE ECLAYIEDYM IKNGPFDGLL GFSQGAFLTA AIPGMQEQGS ALTKVPKVKF LVIISGAKIP GLMFGEPKAA VNAFSSPVRC
201: PSLHFIGERD FLKIEGEVLV ESFVEPVVIH HSGGHIIPKL DTKAEETMLS FFQSIRQMLS DESGSVRSLM
101: PPYYEWYQAN KGFKEYRNFE ECLAYIEDYM IKNGPFDGLL GFSQGAFLTA AIPGMQEQGS ALTKVPKVKF LVIISGAKIP GLMFGEPKAA VNAFSSPVRC
201: PSLHFIGERD FLKIEGEVLV ESFVEPVVIH HSGGHIIPKL DTKAEETMLS FFQSIRQMLS DESGSVRSLM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.