Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003504_P002 | Maize | plastid | 87.35 | 92.47 |
| Os04t0450100-01 | Rice | cytosol | 75.49 | 77.96 |
| TraesCS2A01G317900.1 | Wheat | mitochondrion | 72.33 | 75.62 |
| TraesCS2B01G336000.1 | Wheat | mitochondrion | 72.73 | 75.41 |
| TraesCS2D01G315600.1 | Wheat | mitochondrion | 72.33 | 75.0 |
| HORVU2Hr1G079020.10 | Barley | cytosol | 47.83 | 72.46 |
| HORVU3Hr1G038300.1 | Barley | mitochondrion | 20.55 | 71.23 |
| GSMUA_Achr7P12840_001 | Banana | mitochondrion | 64.43 | 68.49 |
| GSMUA_Achr10P... | Banana | cytosol | 65.22 | 68.46 |
| HORVU3Hr1G056660.1 | Barley | mitochondrion | 21.74 | 65.48 |
| KRH16812 | Soybean | cytosol | 55.73 | 64.98 |
| VIT_18s0001g07090.t01 | Wine grape | mitochondrion | 57.71 | 64.6 |
| KRH72422 | Soybean | cytosol | 54.55 | 63.59 |
| GSMUA_Achr3P06720_001 | Banana | cytosol | 60.08 | 62.55 |
| Solyc04g074950.2.1 | Tomato | cytosol, mitochondrion, nucleus | 52.57 | 59.64 |
| CDY24838 | Canola | mitochondrion | 54.94 | 59.15 |
| Bra010491.1-P | Field mustard | cytosol | 48.62 | 58.85 |
| CDY08935 | Canola | cytosol, mitochondrion | 54.55 | 58.72 |
| HORVU2Hr1G026600.1 | Barley | mitochondrion | 23.32 | 57.84 |
| HORVU2Hr1G063400.1 | Barley | mitochondrion | 23.32 | 57.84 |
| CDY34285 | Canola | cytosol | 52.17 | 57.39 |
| Bra013797.1-P | Field mustard | cytosol | 52.17 | 57.39 |
| CDY03451 | Canola | cytosol | 52.17 | 57.39 |
| HORVU7Hr1G079930.1 | Barley | mitochondrion | 21.74 | 54.46 |
| HORVU5Hr1G035170.1 | Barley | mitochondrion | 21.74 | 53.92 |
| Solyc04g074960.2.1 | Tomato | cytosol, mitochondrion, plastid | 51.78 | 50.97 |
| AT4G24380.3 | Thale cress | mitochondrion | 52.17 | 50.57 |
| KRH48828 | Soybean | cytosol | 9.88 | 49.02 |
| HORVU3Hr1G056710.1 | Barley | mitochondrion | 24.51 | 44.93 |
| KXG37006 | Sorghum | cytosol | 40.71 | 24.88 |
| OQU86675 | Sorghum | cytosol | 10.28 | 17.45 |
| EER94946 | Sorghum | cytosol | 10.28 | 17.45 |
| EES19728 | Sorghum | cytosol | 10.28 | 17.45 |
Protein Annotations
| EnsemblPlants:KXG26427 | EnsemblPlantsGene:SORBI_3006G099700 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:FSH_dom | InterPro:IPR029058 |
| PANTHER:PTHR22778 | PANTHER:PTHR22778:SF25 | PFAM:PF03959 | ProteinID:KXG26427 | ProteinID:KXG26427.1 | SEG:seg |
| SUPFAM:SSF53474 | UniParc:UPI0001FCB2FB | UniProt:A0A1B6PL89 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr6:+:47044379..47047015
Molecular Weight (calculated)
28483.1 Da
IEP (calculated)
4.858
GRAVY (calculated)
-0.247
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLGADAEP QGARRRPRFL CLHGFRTSAE IMRKQVLGKW PADVTARLDL VFADAPFPAE GKSDVDGIFD PPYYEWFQFD KSFMEYRNFD KCLAYIEELM
101: IRDGPFDGLM GFSQGSYLSA ALPGLQEQGL ALTRVPKIKY LIIIGGGKFQ SPTVAEKAYA NKVACPSLHF IGDNDFLKVH GEKLIESFVD PFLIRHPKGH
201: TVPRLDDESL AVMLRFLEKI EGEVLEYSSK DKIEGEVLEY SSKDVNENEE VCL
101: IRDGPFDGLM GFSQGSYLSA ALPGLQEQGL ALTRVPKIKY LIIIGGGKFQ SPTVAEKAYA NKVACPSLHF IGDNDFLKVH GEKLIESFVD PFLIRHPKGH
201: TVPRLDDESL AVMLRFLEKI EGEVLEYSSK DKIEGEVLEY SSKDVNENEE VCL
001: MGSEGRSIAR KPRFLCLHGF RTSGEIMKIQ LHKWPKSVID RLDLVFLDAP FPCQGKSDVE GIFDPPYYEW FQFNKEFTEY TNFEKCLEYL EDRMIKLGPF
101: DGLIGFSQGA ILSGGLPGLQ AKGIAFQKVP KIKFVIIIGG AKLKSAKLAE NAYSSSLETL SLHFLGETDF LKPYGTQLIE SYKNPVVVHH PKGHTVPRLD
201: EKSLEKVTAF IDTLEHLVME EDKNGEENTS KPTK
101: DGLIGFSQGA ILSGGLPGLQ AKGIAFQKVP KIKFVIIIGG AKLKSAKLAE NAYSSSLETL SLHFLGETDF LKPYGTQLIE SYKNPVVVHH PKGHTVPRLD
201: EKSLEKVTAF IDTLEHLVME EDKNGEENTS KPTK
Arabidopsis Description
INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BE /.../bidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G24380]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.