Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19728 | Sorghum | cytosol | 100.0 | 100.0 |
| EER94946 | Sorghum | cytosol | 100.0 | 100.0 |
| CDX70966 | Canola | cytosol | 98.66 | 98.66 |
| KRH73482 | Soybean | cytosol | 98.66 | 98.66 |
| KRH64911 | Soybean | cytosol | 98.66 | 98.66 |
| KRH57715 | Soybean | cytosol | 98.66 | 98.66 |
| KRH14671 | Soybean | cytosol | 98.66 | 98.66 |
| KRG94210 | Soybean | nucleus | 98.66 | 98.66 |
| CDY51259 | Canola | cytosol | 98.66 | 98.66 |
| CDY47377 | Canola | cytosol | 98.66 | 98.66 |
| CDY35428 | Canola | cytosol | 98.66 | 98.66 |
| CDY27197 | Canola | cytosol | 98.66 | 98.66 |
| CDY22503 | Canola | cytosol | 98.66 | 98.66 |
| CDY16599 | Canola | cytosol | 98.66 | 98.66 |
| CDY09106 | Canola | cytosol | 98.66 | 98.66 |
| CDX88824 | Canola | cytosol | 98.66 | 98.66 |
| CDX87950 | Canola | cytosol | 98.66 | 98.66 |
| CDX76012 | Canola | cytosol | 98.66 | 98.66 |
| CDX67656 | Canola | cytosol | 98.66 | 98.66 |
| TraesCS3B01G214400.1 | Wheat | cytosol | 96.64 | 98.63 |
| Zm00001d007194_P001 | Maize | cytosol | 62.42 | 94.9 |
| Zm00001d010650_P001 | Maize | cytosol | 63.09 | 83.19 |
| Zm00001d040323_P001 | Maize | cytosol | 62.42 | 82.3 |
| KXG26427 | Sorghum | cytosol | 17.45 | 10.28 |
| KXG37006 | Sorghum | cytosol | 12.75 | 4.59 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:8064169 | EntrezGene:8083705 | UniProt:C5X1U2 | ProteinID:EER94946.1 |
| ProteinID:EES19728.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:IPR002048 | EnsemblPlants:OQU86675 | ProteinID:OQU86675 | ProteinID:OQU86675.1 | PFAM:PF13499 |
| ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF250 | SMART:SM00054 | EnsemblPlantsGene:SORBI_3003G125650 |
| SUPFAM:SSF47473 | unigene:Sbi.20194 | unigene:Sbi.20250 | UniParc:UPI00000013B8 | RefSeq:XP_002441298.1 | RefSeq:XP_002467948.1 |
Description
hypothetical protein
Coordinates
chr3:-:11404741..11408813
Molecular Weight (calculated)
16832.6 Da
IEP (calculated)
3.876
GRAVY (calculated)
-0.602
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQLTDDQI AEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAK
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMANH VWECASKLIK KRKKKKKKKK KKKTKNAKRN EKELIQHNPS QPESHRVPSR
201: LNLLCHRSHS CSIL
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMANH VWECASKLIK KRKKKKKKKK KKKTKNAKRN EKELIQHNPS QPESHRVPSR
201: LNLLCHRSHS CSIL
Arabidopsis Description
CAM7Calmodulin 7 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.