CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73482	Soybean	cytosol	100.0	100.0
KRH64911	Soybean	cytosol	100.0	100.0
KRH14671	Soybean	cytosol	100.0	100.0
KRG94210	Soybean	nucleus	100.0	100.0
TraesCS1D01G308100.1	Wheat	cytosol, nucleus, plastid, unclear	99.33	99.33
TraesCS1B01G319400.1	Wheat	cytosol	99.33	99.33
HORVU0Hr1G001270.1	Barley	cytosol	99.33	99.33
HORVU4Hr1G052210.2	Barley	cytosol	98.66	98.66
TraesCS2D01G097500.1	Wheat	cytosol	98.66	98.66
TraesCS2A01G098100.1	Wheat	cytosol	98.66	98.66
OQU86675	Sorghum	cytosol	98.66	98.66
TraesCS4B01G178200.1	Wheat	cytosol, plastid, unclear	98.66	98.66
CDX67656	Canola	cytosol	98.66	98.66
EER94946	Sorghum	cytosol	98.66	98.66
CDX70966	Canola	cytosol	98.66	98.66
CDX76012	Canola	cytosol	98.66	98.66
CDX87950	Canola	cytosol	98.66	98.66
CDX88824	Canola	cytosol	98.66	98.66
CDY09106	Canola	cytosol	98.66	98.66
CDY16599	Canola	cytosol	98.66	98.66
CDY22503	Canola	cytosol	98.66	98.66
CDY27197	Canola	cytosol	98.66	98.66
CDY35428	Canola	cytosol	98.66	98.66
CDY47377	Canola	cytosol	98.66	98.66
CDY51259	Canola	cytosol	98.66	98.66
EES19728	Sorghum	cytosol	98.66	98.66
TraesCS4D01G179800.1	Wheat	cytosol	97.99	97.99
TraesCS4A01G126700.1	Wheat	cytosol	97.99	97.99
HORVU3Hr1G040040.1	Barley	cytosol	97.32	97.32
TraesCS3B01G214400.1	Wheat	cytosol	95.3	97.26
Zm00001d007194_P001	Maize	cytosol	62.42	94.9
Zm00001d010650_P001	Maize	cytosol	63.09	83.19
Zm00001d040323_P001	Maize	cytosol	62.42	82.3
KRH72422	Soybean	cytosol	17.45	11.98
KRH16812	Soybean	cytosol	17.45	11.98
KRH64918	Soybean	cytosol	12.75	7.09
KRG94970	Soybean	cytosol	12.75	7.09
KRH48828	Soybean	cytosol	2.01	5.88
KRH69648	Soybean	cytosol	3.36	3.12
KRH69644	Soybean	cytosol	2.68	1.77

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100791702	EntrezGene:100793700	EntrezGene:100817351	PDB:2RO8	MapMan:35.1
EntrezGene:547966	EntrezGene:548063	EMBL:ACUP02001278	EMBL:ACUP02001299	EMBL:ACUP02002884	EMBL:ACUP02008514
EMBL:ACUP02011823	EMBL:BT089094	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_05G079700
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0046872	InterPro:IPR002048	ProteinID:KRG94210.1
ProteinID:KRH14671.1	EnsemblPlants:KRH57715	ProteinID:KRH57715	ProteinID:KRH57715.1	ProteinID:KRH64911.1	ProteinID:KRH73482.1
EMBL:L01430	EMBL:L01432	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR23050
PANTHER:PTHR23050:SF250	UniProt:Q6LEG8	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI00000003A6	:

Description

hypothetical protein

Coordinates

chr5:-:11307078..11309449

Molecular Weight (calculated)

16862.6 Da

IEP (calculated)

3.881

GRAVY (calculated)

-0.619

Length

149 amino acids

Sequence
(BLAST)

001: MADQLTDEQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAK

Best Arabidopsis Sequence Match ( AT3G43810.2 )
(BLAST)

001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMANH VWECASKLIK KRKKKKKKKK KKKTKNAKRN EKELIQHNPS QPESHRVPSR
201: LNLLCHRSHS CSIL

Arabidopsis Description

CAM7Calmodulin 7 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPJ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.