Factsheet for PGSC0003DMT400060470

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g054620.2.1	Tomato	cytosol	95.47	95.47
VIT_13s0019g00740.t01	Wine grape	cytosol	67.54	68.69
PGSC0003DMT400095663	Potato	cytosol	16.47	66.99
AT2G39570.1	Thale cress	cytosol	65.16	66.42
KRH01630	Soybean	cytosol	66.35	66.35
Bra017063.1-P	Field mustard	cytosol	62.77	64.78
CDY07020	Canola	cytosol	62.77	64.78
CDX93251	Canola	cytosol	59.43	64.51
GSMUA_Achr6P15290_001	Banana	cytosol	60.62	61.06
GSMUA_Achr8P20880_001	Banana	cytosol	60.62	61.06
GSMUA_Achr10P...	Banana	cytosol	58.47	58.89
GSMUA_Achr6P33370_001	Banana	cytosol	8.35	56.45
OQU77242	Sorghum	cytosol	59.43	55.7
TraesCS1D01G037700.1	Wheat	cytosol, mitochondrion, nucleus	57.52	54.65
Zm00001d035634_P001	Maize	cytosol	57.76	54.63
TraesCS1A01G036100.1	Wheat	cytosol	57.52	54.04
TraesCS1B01G046300.1	Wheat	cytosol	57.28	53.69
HORVU0Hr1G000160.2	Barley	cytosol, extracellular	16.23	52.31
Os05t0113000-01	Rice	cytosol	53.46	48.91
PGSC0003DMT400009864	Potato	cytosol, peroxisome, plasma membrane	49.64	47.6
Zm00001d011051_P004	Maize	plastid	57.28	46.42
GSMUA_Achr6P33360_001	Banana	cytosol	14.8	39.24

Protein Annotations

EnsemblPlants:PGSC0003DMT400060470	EnsemblPlantsGene:PGSC0003DMG400023521	EntrezGene:102604712	Gene3D:3.30.70.260	InterPro:ACT_dom	InterPro:IPR002912
PANTHER:PTHR31096	PANTHER:PTHR31096:SF4	PFscan:PS51671	PGSC:PGSC0003DMG400023521	RefSeq:XP_006345943.1	SUPFAM:SSF55021
UniParc:UPI000295A70F	UniProt:M1C5Y1	MapMan:35.1	:	:	:

Description

Amino acid binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400023521]

Coordinates

chr5:+:50381593..50386036

Molecular Weight (calculated)

47235.3 Da

IEP (calculated)

5.711

GRAVY (calculated)

-0.096

Length

419 amino acids

Sequence
(BLAST)

001: MGIAWDDVVL IEHRGKSDEP TSITVNCPDK AGLGCDLCRI VLEFGLYVTR GDFATDGKWC YIVLWVVPRP SSLKVDWGSL KNRLMSSCPS CMISFYLNQQ
101: STASAPPSVY LLEVFCLDRK GLLHDVTKIL CELELTIQRV KVMTTPDDKV LDLFFITDCM DLLHTKQRRD ETCEHLSNVL GEYCISCELQ LSGPECEVQH
201: GFTSLPQEVA EELFSCELSK EAVPMSSASD TAKLKKATIT VDNLLSPVHT LLQIQCVDQK GLIYDILKTS KDCDIRIAFG RIQSTAKGYR TIDLFIQTTD
301: GKKIIDDENI KFLCSRLKEE MLHPLRVTVG SRGPDTELLV ANPVELSGKG RPRVFYDVTI ALKELGICIF SAEIARHSTA ERQWEVYRFR LDESPEYPLA
401: SKKARIDIMD KVKKTLMGW

Best Arabidopsis Sequence Match ( AT2G39570.1 )
(BLAST)

001: MGILNDDAVL IEPGKISGDP TVVTVNCPDE SGLGSTLCRI ILEFGLSITR ADFSTDGRWC YIVFWVTPDI SSPKIDWDSL KNRLLSACPS CLGSFYFCLQ
101: SNVSKPPSLY LLKFFCRDRK GLLHDVTKVL TELEFTIQRV KVMTTPDGRV LDMFFITDAM DLLHTKQRQT KTCDHLTAVL GEHGVSCELE LAGPELESVQ
201: RFSSLPPLAA DELFGPDGFD ISGSSSNKAV LTVDNQLSPA HTLLQIRCVD QKGLFYDILR TSKDCDVHIA YGRFSSKVKG YRNLELFVRG TDGNKIMDPK
301: HQANFCARLK EEMVCPLRVI IVNRGPDTEL LVANPVELSG KGRPRVFYDV TLALKSLGIC IFSAEIGRHS TLDRQWEVYR FLLDESREFP LASLRARNQV
401: VDRVTKTLMG W

Arabidopsis Description

ACR9ACT domain-containing protein ACR9 [Source:UniProtKB/Swiss-Prot;Acc:O80644]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.