Factsheet for VIT_13s0019g00740.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g054620.2.1	Tomato	cytosol	69.66	68.5
Bra017063.1-P	Field mustard	cytosol	67.48	68.47
VIT_06s0004g04360.t01	Wine grape	cytosol	69.66	68.33
CDY07020	Canola	cytosol	67.23	68.23
AT2G39570.1	Thale cress	cytosol	67.96	68.13
KRH01630	Soybean	cytosol	69.17	68.02
CDX93251	Canola	cytosol	63.59	67.88
PGSC0003DMT400060470	Potato	cytosol	68.69	67.54
GSMUA_Achr8P20880_001	Banana	cytosol	64.32	63.7
GSMUA_Achr6P15290_001	Banana	cytosol	63.84	63.22
GSMUA_Achr10P...	Banana	cytosol	61.65	61.06
OQU77242	Sorghum	cytosol	61.65	56.82
Zm00001d035634_P001	Maize	cytosol	60.19	55.98
TraesCS1D01G037700.1	Wheat	cytosol, mitochondrion, nucleus	59.71	55.78
TraesCS1A01G036100.1	Wheat	cytosol	59.71	55.16
TraesCS1B01G046300.1	Wheat	cytosol	59.47	54.81
GSMUA_Achr6P33370_001	Banana	cytosol	8.01	53.23
VIT_13s0019g05110.t01	Wine grape	cytosol	52.43	51.92
Os05t0113000-01	Rice	cytosol	57.28	51.53
VIT_08s0007g04890.t01	Wine grape	cytosol, plasma membrane, vacuole	50.97	51.09
HORVU0Hr1G000160.2	Barley	cytosol, extracellular	15.78	50.0
VIT_13s0019g05100.t01	Wine grape	cytosol	50.49	50.0
Zm00001d011051_P004	Maize	plastid	58.98	47.0
GSMUA_Achr6P33360_001	Banana	cytosol	15.78	41.14

Protein Annotations

EntrezGene:100256399	wikigene:100256399	Gene3D:3.30.70.260	MapMan:35.1	InterPro:ACT_dom	ProteinID:CBI31701
ProteinID:CBI31701.3	UniProt:D7TLW4	EMBL:FN595998	InterPro:IPR002912	EntrezGene:LOC100256399	wikigene:LOC100256399
PFAM:PF01842	PFscan:PS51671	PANTHER:PTHR31096	PANTHER:PTHR31096:SF18	SUPFAM:SSF55021	UniParc:UPI0001984749
ArrayExpress:VIT_13s0019g00740	EnsemblPlantsGene:VIT_13s0019g00740	EnsemblPlants:VIT_13s0019g00740.t01	unigene:Vvi.16980	RefSeq:XP_002283917	RefSeq:XP_002283917.1

Description

No Description!

Coordinates

chr13:-:2645622..2649716

Molecular Weight (calculated)

46584.4 Da

IEP (calculated)

6.356

GRAVY (calculated)

-0.141

Length

412 amino acids

Sequence
(BLAST)

001: MGIFCDDAVL IQKGNKPGEP CSITINCPDK AGLGCDLCRI ILEFGLCIAR GDFSTDGRWC YIVFSFVPCP SSLKIDWESL KNRLLSACPS PLFSYCFNQQ
101: YGSSPSPVYM LKLFCLDRNG LLHDVTKVLS ELEFTIERVK VMTTPDGRVL DLFFITDGME LLHTKKRQDD TCARLLAVLG EFNVICEIQL AGPEYRSQQG
201: CSSLSPEIAE ELFGSELLDN KSNMTKLENG TITVDNFLSP AHTLLQIQCL DQKGLFYDIM RTSKDCNIQI AYGRFNPSVK GYRNMDLFIQ KTDGKKIIDP
301: EYQASLCSRL KEEMLHPLRV TITNRGPDAE LLVANPVELS GKGRPRVFYD VTCTLKTLGI CIFSGEIVRH STSNREWEVY RFRLEESVEF PLTSSRSRSQ
401: IVDRVKRTLM GW

Best Arabidopsis Sequence Match ( AT2G39570.1 )
(BLAST)

001: MGILNDDAVL IEPGKISGDP TVVTVNCPDE SGLGSTLCRI ILEFGLSITR ADFSTDGRWC YIVFWVTPDI SSPKIDWDSL KNRLLSACPS CLGSFYFCLQ
101: SNVSKPPSLY LLKFFCRDRK GLLHDVTKVL TELEFTIQRV KVMTTPDGRV LDMFFITDAM DLLHTKQRQT KTCDHLTAVL GEHGVSCELE LAGPELESVQ
201: RFSSLPPLAA DELFGPDGFD ISGSSSNKAV LTVDNQLSPA HTLLQIRCVD QKGLFYDILR TSKDCDVHIA YGRFSSKVKG YRNLELFVRG TDGNKIMDPK
301: HQANFCARLK EEMVCPLRVI IVNRGPDTEL LVANPVELSG KGRPRVFYDV TLALKSLGIC IFSAEIGRHS TLDRQWEVYR FLLDESREFP LASLRARNQV
401: VDRVTKTLMG W

Arabidopsis Description

ACR9ACT domain-containing protein ACR9 [Source:UniProtKB/Swiss-Prot;Acc:O80644]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.