Factsheet for VIT_06s0004g04360.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400095663	Potato	cytosol	18.57	75.73
KRH10287	Soybean	plasma membrane	74.29	73.41
KRH23044	Soybean	cytosol	61.9	69.71
VIT_13s0019g00740.t01	Wine grape	cytosol	68.33	69.66
CDX68360	Canola	cytosol	66.43	68.05
GSMUA_Achr8P20880_001	Banana	cytosol	66.19	66.83
GSMUA_Achr10P...	Banana	cytosol	63.81	64.42
GSMUA_Achr6P15290_001	Banana	cytosol	63.81	64.42
GSMUA_Achr6P33370_001	Banana	cytosol	8.81	59.68
OQU77242	Sorghum	cytosol	61.67	57.94
Bra033831.1-P	Field mustard	cytosol	59.29	57.51
Zm00001d035634_P001	Maize	cytosol	60.24	57.11
VIT_08s0007g04890.t01	Wine grape	cytosol, plasma membrane, vacuole	55.71	56.93
TraesCS1D01G037700.1	Wheat	cytosol, mitochondrion, nucleus	59.52	56.69
TraesCS1B01G046300.1	Wheat	cytosol	59.76	56.15
TraesCS1A01G036100.1	Wheat	cytosol	59.52	56.05
VIT_13s0019g05110.t01	Wine grape	cytosol	54.76	55.29
VIT_13s0019g05100.t01	Wine grape	cytosol	51.67	52.16
Os05t0113000-01	Rice	cytosol	56.19	51.53
HORVU0Hr1G000160.2	Barley	cytosol, extracellular	15.24	49.23
Zm00001d011051_P004	Maize	plastid	60.24	48.94
GSMUA_Achr6P33360_001	Banana	cytosol	15.48	41.14

Protein Annotations

EntrezGene:100262189	wikigene:100262189	Gene3D:3.30.70.260	MapMan:35.1	InterPro:ACT_dom	ProteinID:CBI16169
ProteinID:CBI16169.3	UniProt:D7SKJ2	EMBL:FN594951	InterPro:IPR002912	EntrezGene:LOC100262189	wikigene:LOC100262189
PFAM:PF01842	PFscan:PS51671	PANTHER:PTHR31096	PANTHER:PTHR31096:SF18	SUPFAM:SSF55021	TIGR:TC56847
UniParc:UPI0001983635	ArrayExpress:VIT_06s0004g04360	EnsemblPlantsGene:VIT_06s0004g04360	EnsemblPlants:VIT_06s0004g04360.t01	unigene:Vvi.13514	RefSeq:XP_002284171
RefSeq:XP_002284171.1	RefSeq:XP_010651049.1	:	:	:	:

Description

No Description!

Coordinates

chr6:-:5345385..5349684

Molecular Weight (calculated)

47505.8 Da

IEP (calculated)

6.495

GRAVY (calculated)

-0.041

Length

420 amino acids

Sequence
(BLAST)

001: MIVLNDDVVL IQKGTKLGEP CVITVNCPDK TGLGCDICRT ILNFGLYITK GDISTDGIWC YIVLWVIPHS SSHIIRWSNL KDRLISICPP CSVSYCFNQQ
101: SDCTAPSPVY LLKFFCLDRK GLLHDVTQVL SELELTIQRV KVTTTPDGRV LDLFFITDNM ELLHTKKRQD DTLEQLYAVL GESCISCELQ LAGPEYENHQ
201: CVSSLSPGIA EELFRCELSD KESHSQALSP DMTILKKASV IVDNSLSPAH TLLQIYCVDH KGLVYDILRT LKDCNIKISY GRLSQNTKGY RDLDLFIQQK
301: DGKKIVDPEK QSALCSRLKV EMLHPLRVVI SNRGPDTELL VANPVELSGK GRPRVFFDAT LALKMLGICI FSAEIGRHST SDREWEVYKF LLEENCEFQL
401: LNMVGRNQIV DRLRRILMGW

Best Arabidopsis Sequence Match ( AT2G39570.1 )
(BLAST)

001: MGILNDDAVL IEPGKISGDP TVVTVNCPDE SGLGSTLCRI ILEFGLSITR ADFSTDGRWC YIVFWVTPDI SSPKIDWDSL KNRLLSACPS CLGSFYFCLQ
101: SNVSKPPSLY LLKFFCRDRK GLLHDVTKVL TELEFTIQRV KVMTTPDGRV LDMFFITDAM DLLHTKQRQT KTCDHLTAVL GEHGVSCELE LAGPELESVQ
201: RFSSLPPLAA DELFGPDGFD ISGSSSNKAV LTVDNQLSPA HTLLQIRCVD QKGLFYDILR TSKDCDVHIA YGRFSSKVKG YRNLELFVRG TDGNKIMDPK
301: HQANFCARLK EEMVCPLRVI IVNRGPDTEL LVANPVELSG KGRPRVFYDV TLALKSLGIC IFSAEIGRHS TLDRQWEVYR FLLDESREFP LASLRARNQV
401: VDRVTKTLMG W

Arabidopsis Description

ACR9ACT domain-containing protein ACR9 [Source:UniProtKB/Swiss-Prot;Acc:O80644]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.