Factsheet for VIT_13s0019g05110.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0019g05100.t01	Wine grape	cytosol	87.26	87.26
VIT_08s0007g04890.t01	Wine grape	cytosol, plasma membrane, vacuole	72.36	73.24
GSMUA_Achr5P10700_001	Banana	cytosol	65.38	64.92
GSMUA_AchrUn_...	Banana	cytosol	62.74	62.89
Zm00001d019759_P001	Maize	cytosol	57.93	57.66
Os09t0570900-01	Rice	cytosol	58.89	57.38
TraesCS4A01G311700.1	Wheat	cytosol	57.45	57.04
HORVU4Hr1G000770.4	Barley	cytosol	58.17	56.94
TraesCS4D01G002500.1	Wheat	cytosol	57.93	56.84
TraesCS4B01G000500.1	Wheat	cytosol	57.93	56.18
VIT_06s0004g04360.t01	Wine grape	cytosol	55.29	54.76
Zm00001d005317_P001	Maize	cytosol	56.73	54.5
TraesCS4A01G310400.1	Wheat	cytosol, plasma membrane, plastid	47.12	52.97
VIT_13s0019g00740.t01	Wine grape	cytosol	51.92	52.43
OQU89044	Sorghum	cytosol	56.73	46.83

Protein Annotations

EntrezGene:100266711	wikigene:100266711	Gene3D:3.30.70.260	MapMan:35.1	InterPro:ACT_dom	ProteinID:CBI31401
ProteinID:CBI31401.3	UniProt:D7TM34	EMBL:FN595998	InterPro:IPR002912	EntrezGene:LOC100266711	wikigene:LOC100266711
PFscan:PS51671	PANTHER:PTHR31096	PANTHER:PTHR31096:SF19	SUPFAM:SSF55021	TIGR:TC62619	UniParc:UPI00015C974F
ArrayExpress:VIT_13s0019g05110	EnsemblPlantsGene:VIT_13s0019g05110	EnsemblPlants:VIT_13s0019g05110.t01	unigene:Vvi.12010	RefSeq:XP_002266940	RefSeq:XP_002266940.1

Description

No Description!

Coordinates

chr13:-:6865577..6870091

Molecular Weight (calculated)

47132.1 Da

IEP (calculated)

6.906

GRAVY (calculated)

-0.204

Length

416 amino acids

Sequence
(BLAST)

001: MGILYDYEDV VLIRQAEKPG DPAEITVNCP DKTGLGCDLC RIILQFGLSI TRGDVSTDGK WCYILFWVVG KPNTRWNLLH KRLMEVCPSC SSASGISFYK
101: PEFQQQPKPP DVFLLKFWCY HDRKGLLHDV TEVLCELELT IKRVKVSTAP DGRVMDLFFV TDTRNELHTK KRQEDTIHRL KAVLGDAMMS VEIELAGPEV
201: TACSQGSSFL PPAITEEIFS LELPNERSNG SAASNSLSVT MDNSLSPSHT LIQIICQDHK GLIYDIMRTL KDYNIQTSYG RFSANAKGMC EADLLVRQVD
301: GKKIVDPNKR NALSSRLRME LFRPLRVAVR SRGPDTELLV ANPVELSGRG RPLVFYDITL ALKLLNIQIF SVEIARHMIQ DREWEVYRIL LDEGDGFCVS
401: RNKIEEGVRK KLMGWE

Best Arabidopsis Sequence Match ( AT2G36840.1 )
(BLAST)

001: MGILSDDVVI ISQSEKEGDP SVITINCPDK TGLGCDLCRI LLFFGLNIVR GDVSTDGKWC YLVFWVIGKP NTRWNLLKMR LVEASPSFSW AFGISRCYLS
101: DSESQPPKLP DLFLLKLACS DRTGLLYDVT EVLYKLEINI EKVKISTTPD GKVMDLFFVT DTRELLGTVK RRNEVYEYLR DAIGDSMISY DIELVGPEIT
201: ACSTSSSVAE TLFSSDVSGE HSSGLHTSSN VSIAVDNSLS SAHTLIHITC QDHKGLLYDI MRTFKDFNIQ ISYGRFTIKL GKNCEIDLFI VQSDGRKILD
301: SSKLNALITR LRAELQQPLR VVMMNRGPDT ELLVTNPVEL SGKGRPQVFH DIALALKKID TCIFSAEIGR HVTGDREWEV YKVLINEEDS LPIPRSKIEE
401: EVWKTLMGWE

Arabidopsis Description

ACR10ACT domain-containing protein ACR10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.