Factsheet for GSMUA_Achr6P33360_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23044	Soybean	cytosol	41.77	17.69
CDX93251	Canola	cytosol	41.14	16.84
KRH01630	Soybean	cytosol	44.3	16.71
AT2G39570.1	Thale cress	cytosol	43.04	16.55
Bra017063.1-P	Field mustard	cytosol	41.77	16.26
GSMUA_Achr8P20880_001	Banana	cytosol	42.41	16.11
CDY07020	Canola	cytosol	41.14	16.01
GSMUA_Achr10P...	Banana	cytosol	41.77	15.87
GSMUA_Achr6P15290_001	Banana	cytosol	41.77	15.87
VIT_13s0019g00740.t01	Wine grape	cytosol	41.14	15.78
KRH10287	Soybean	plasma membrane	41.77	15.53
VIT_06s0004g04360.t01	Wine grape	cytosol	41.14	15.48
OQU77242	Sorghum	cytosol	43.04	15.21
Zm00001d035634_P001	Maize	cytosol	42.41	15.12
TraesCS1D01G037700.1	Wheat	cytosol, mitochondrion, nucleus	41.77	14.97
TraesCS1A01G036100.1	Wheat	cytosol	41.77	14.8
PGSC0003DMT400060470	Potato	cytosol	39.24	14.8
Solyc05g054620.2.1	Tomato	cytosol	39.24	14.8
CDX68360	Canola	cytosol	37.97	14.63
TraesCS1B01G046300.1	Wheat	cytosol	41.14	14.54
Bra033831.1-P	Field mustard	cytosol	36.08	13.16
GSMUA_Achr5P10700_001	Banana	cytosol	34.81	13.13
GSMUA_AchrUn_...	Banana	cytosol	32.28	12.29
Zm00001d011051_P004	Maize	plastid	39.24	11.99
Os05t0113000-01	Rice	cytosol	29.75	10.26
GSMUA_Achr6P33370_001	Banana	cytosol	0.63	1.61
HORVU0Hr1G000160.2	Barley	cytosol, extracellular	1.27	1.54
PGSC0003DMT400095663	Potato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr6P33360_001	EnsemblPlants:GSMUA_Achr6T33360_001	EnsemblPlantsGene:GSMUA_Achr6G33360_001	PANTHER:PTHR31096	PANTHER:PTHR31096:SF18	SEG:seg
UniParc:UPI000295B2DF	UniProt:M0TCC9	MapMan:35.1	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G33360_001]

Coordinates

chr6:-:32453325..32454205

Molecular Weight (calculated)

18152.9 Da

IEP (calculated)

10.310

GRAVY (calculated)

-0.382

Length

158 amino acids

Sequence
(BLAST)

001: MEMLHPLRVM IANRGPDTEL LVANPAELSG KRRPHVFYDA IHALKSARNL HFSAEIGRHS SSDRQWEVYR FILDDSRDFP LASSQATRQI VDRVRRTLMA
101: NTLQSCPPNP FMVPCIAFDL AALPRSNWDY RRSQAASEDY RSPLKLLMLL FAKKKNIS

Best Arabidopsis Sequence Match ( AT5G06310.1 )
(BLAST)

001: MEEERRDDYK FLRIQDAFKA LHLHVNLIGV IVELGFSNGS DCSCTLKIVD PWYSGSGLPV KFVARTIRDL PRVESIGDII LLSRVKIVLI NRKITALCNE
101: TTSSSFALFN GKHSVDSIPY QSSPKFLMRE QDKNFLSNLR EWMITYKFED GSCCFTSLKD IKEGECSNLS CQIVHISKVY KDRWYLFVWD GTEMPPCNIL
201: VKSERLPLCV EPEMLPTYML RKFPTFGSVL RIIVDRVSEK QAIHCLQPGQ HVKLLNLFFQ VNMGLWNATF TPSTKMQYTM SREMEAFSPQ RMCGEKFSPR
301: WNPIARCISR SHSEITGVAH DDAPFVSLMD ILTYHNVTAK FRCVVRFIQV YPRDVRKLRD INGNIKLVAI LEDATARIHA SLYADEGEKF FGCDESDEEA
401: LVKKLNRLLG GEEMEKVPRN PPWVQCCLFS FYKHKMDQWE SRRFRIFDTW INAS

Arabidopsis Description

POT1BProtection of telomeres protein 1b [Source:UniProtKB/Swiss-Prot;Acc:Q6NKX5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.