Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400091690 | Potato | cytosol | 73.03 | 49.12 |
| KRG95161 | Soybean | nucleus | 24.34 | 11.35 |
| KRH66847 | Soybean | cytosol | 21.71 | 9.54 |
| PGSC0003DMT400017586 | Potato | nucleus | 25.0 | 6.14 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400089655 | EnsemblPlantsGene:PGSC0003DMG400039226 | PANTHER:PTHR34567 | PGSC:PGSC0003DMG400039226 | UniParc:UPI000296DD6D | UniProt:M1DIM2 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400039226]
Coordinates
chr00:+:29290280..29290738
Molecular Weight (calculated)
17964.1 Da
IEP (calculated)
4.430
GRAVY (calculated)
-0.589
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: VIIPFWEKEF CLKNSSFKSW KNFLRYKENT RFYYEILNWD DSAGEKAFYD SKNKFNDEFR NLPFDNLELQ NLDLYIDEID WNPKIDTNLL EELEFALMMK
101: KKETDLVQVR TLIKEIVPSS WDVDDDVYKN GLTGIIVGDH SKSGEGVKVS PS
101: KKETDLVQVR TLIKEIVPSS WDVDDDVYKN GLTGIIVGDH SKSGEGVKVS PS
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.