Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0019g00880.t01 | Wine grape | cytosol | 77.33 | 79.12 |
| VIT_08s0056g01110.t01 | Wine grape | cytosol | 76.32 | 78.09 |
| CDX74890 | Canola | cytosol | 67.82 | 76.76 |
| CDX93302 | Canola | peroxisome | 67.25 | 76.18 |
| KRG89095 | Soybean | nucleus | 72.86 | 75.92 |
| CDX91488 | Canola | cytosol | 71.6 | 75.85 |
| Bra005086.1-P | Field mustard | cytosol | 71.66 | 75.82 |
| AT2G38770.1 | Thale cress | cytosol | 71.54 | 75.28 |
| KRH40912 | Soybean | nucleus | 72.1 | 75.03 |
| GSMUA_Achr6P10420_001 | Banana | endoplasmic reticulum, plasma membrane | 40.11 | 72.72 |
| Bra017100.1-P | Field mustard | cytosol | 46.28 | 71.01 |
| OQU92496 | Sorghum | cytosol | 67.63 | 70.98 |
| TraesCS4A01G149500.1 | Wheat | cytosol, nucleus | 68.64 | 69.52 |
| TraesCS4D01G155600.1 | Wheat | cytosol | 68.51 | 69.43 |
| HORVU4Hr1G035890.1 | Barley | cytosol | 68.7 | 68.66 |
| Os03t0387000-01 | Rice | cytosol, extracellular | 25.82 | 68.33 |
| GSMUA_Achr6P10430_001 | Banana | cytosol | 18.83 | 66.89 |
| Zm00001d029375_P002 | Maize | cytosol | 70.34 | 66.45 |
| TraesCSU01G068900.2 | Wheat | cytosol | 18.64 | 63.66 |
| CDX97748 | Canola | cytosol | 4.72 | 40.32 |
Protein Annotations
| MapMan:16.4.5.2.3 | Gene3D:3.40.50.300 | InterPro:Aquarius_N | InterPro:CWF11_fam | GO:GO:0000398 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005681 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016020 |
| UniProt:K4AX94 | InterPro:P-loop_NTPase | PFAM:PF13086 | PFAM:PF13087 | PFAM:PF16399 | PIRSF:PIRSF038901 |
| PANTHER:PTHR10887 | PANTHER:PTHR10887:SF5 | SUPFAM:SSF52540 | EnsemblPlantsGene:Solyc01g068480.2 | EnsemblPlants:Solyc01g068480.2.1 | UniParc:UPI0002761734 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:77720769..77734644
Molecular Weight (calculated)
181121.0 Da
IEP (calculated)
5.314
GRAVY (calculated)
-0.360
Length
1588 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTKVYGTGTY DFRRHRVAEY PVEALPQTAE APQKMLPSMT EKPPESKPGS NIPSSITLAE IQRDRLTKIA ASNWAKTGEK KAFSSELVKE IYDTELTVKG
0101: GRKPVPLQRV MILEVSQYLE NYLWPNFDPE ASSFEHVMSM ILMVNEKFRE NVAAWICFYD RKDMFKAFLD RVLRLKEGRS LTIPEKINYL LFMINAFQSL
0201: EDEIVSKKVL RLAGLQCWHC LSYGRFQMEL CVNPDLIKKW KKIAKRAKEA AKRGESFDTS TMLEVNFLRH LIEEFLEVLD CKIFPQPDDE VDSDLNFTSD
0301: FEGVNDASVL YCERFMEFLI DLLSQLPTRR YIRPVVADVA VVAKCHLSAL YRHEKGKLFA QLVDLLQFYE GFEIDDHLGR QMTDDEVIQA HYDRFQSFQL
0401: LAFKKIPKLR ELALANVGAI HRRADLSKKL SGLTPEELRD LVCRKLKLIS VDDPCSNRVD FLIEVMVSFF ERQQSQKEAI NALPLYPNEQ IMWDESLVPS
0501: INYTGEGCLA LPKLNLQFLT LHDYLLRNFN LFRLESTYEI REDIQEAVPH LLAYINNEGE PAFRGWSRMA VPVKEFKITE VKQPNIGEVK PAAVTAEVTF
0601: SISSYKSQIR SEWNALKEHD VLFLLSIRPS FEPLSAEEAA NATVPQRLGL QCVRGCEIIE MRDEEGILMN DFTGRIKRDE WKPPKGDLRT VTVAIDTAQY
0701: HMDVGDIAEK GAEDIYGTFN ILMRRKPKEN NFKAILESIR DLMNETCIVP DWLHDIFLGY GNPSAAQWTN MPDLLETVDF KDTFLDADHV RESFPDYQVC
0801: FVDQDGLENL QPSPPFKIKL PRNLKGKAHA IPGSENSTTA SVDAAGMPEV HSERDKLIVE AYIPPDPGPY PQDQPKRNSV RFTATQVGAI ISGVQPGLSM
0901: VVGPPGTGKT DTAVQVLNVL YHNCPSQRTL IITHSNQALN DLFEKIMQRD VPARYLLRLG QGEQELATDL DFSRQGRVNA MLVRRLELLS EVERLARSLQ
1001: LPEDVGYTCE TAGYFWLLHV YSRWEQFLAA CAAEQDNPTI VQDKFPFKEF FSDTPQPVFT GQSFGKDMRS AEGCFRHLKT MFQELEECRA FELLKSTVDR
1101: SNYLMTKQAK IVAMTCTHAA LKRKDFLQVG FKYDNLLMEE SAQILEIETF IPMLLQRQED GYARLKRCIL IGDHHQLPPV VKNMAFQKYS HMDQSLFTRF
1201: VRLGIPYIEL NAQGRARPSL ARLYNWRYRE LGDLPYVKEN AVFHKANAGF SYDYQLVDVP DYNGRGESAP SPWFYQNEGE AEYIVSVYMY MRLLGYPANK
1301: ISILTTYNGQ KLLIRDVINR RCVPYDFIGP PHKVATVDKF QGQQNDFILL SLVRTRFVGH LRDVRRLIVA MSRARLGLYV FCRRSLFEQC YELQPTFRLL
1401: LERPDCLALN VEEATSLTNR PVGETGPVSV VSGPEEMQAI VNFKMHQVYQ ARMMSHIEYP AHPESVPEPS VEQNVMSLSH SMDSDKTAME DGTKDTGPSE
1501: SMESTKVPPD AGEMLVVGHS NGEVDGENQR VDSGELGTST GSIEAPHDDA EMLVASQSNG EADGKDQRVD RDGTDLENSS NVESKMEE
0101: GRKPVPLQRV MILEVSQYLE NYLWPNFDPE ASSFEHVMSM ILMVNEKFRE NVAAWICFYD RKDMFKAFLD RVLRLKEGRS LTIPEKINYL LFMINAFQSL
0201: EDEIVSKKVL RLAGLQCWHC LSYGRFQMEL CVNPDLIKKW KKIAKRAKEA AKRGESFDTS TMLEVNFLRH LIEEFLEVLD CKIFPQPDDE VDSDLNFTSD
0301: FEGVNDASVL YCERFMEFLI DLLSQLPTRR YIRPVVADVA VVAKCHLSAL YRHEKGKLFA QLVDLLQFYE GFEIDDHLGR QMTDDEVIQA HYDRFQSFQL
0401: LAFKKIPKLR ELALANVGAI HRRADLSKKL SGLTPEELRD LVCRKLKLIS VDDPCSNRVD FLIEVMVSFF ERQQSQKEAI NALPLYPNEQ IMWDESLVPS
0501: INYTGEGCLA LPKLNLQFLT LHDYLLRNFN LFRLESTYEI REDIQEAVPH LLAYINNEGE PAFRGWSRMA VPVKEFKITE VKQPNIGEVK PAAVTAEVTF
0601: SISSYKSQIR SEWNALKEHD VLFLLSIRPS FEPLSAEEAA NATVPQRLGL QCVRGCEIIE MRDEEGILMN DFTGRIKRDE WKPPKGDLRT VTVAIDTAQY
0701: HMDVGDIAEK GAEDIYGTFN ILMRRKPKEN NFKAILESIR DLMNETCIVP DWLHDIFLGY GNPSAAQWTN MPDLLETVDF KDTFLDADHV RESFPDYQVC
0801: FVDQDGLENL QPSPPFKIKL PRNLKGKAHA IPGSENSTTA SVDAAGMPEV HSERDKLIVE AYIPPDPGPY PQDQPKRNSV RFTATQVGAI ISGVQPGLSM
0901: VVGPPGTGKT DTAVQVLNVL YHNCPSQRTL IITHSNQALN DLFEKIMQRD VPARYLLRLG QGEQELATDL DFSRQGRVNA MLVRRLELLS EVERLARSLQ
1001: LPEDVGYTCE TAGYFWLLHV YSRWEQFLAA CAAEQDNPTI VQDKFPFKEF FSDTPQPVFT GQSFGKDMRS AEGCFRHLKT MFQELEECRA FELLKSTVDR
1101: SNYLMTKQAK IVAMTCTHAA LKRKDFLQVG FKYDNLLMEE SAQILEIETF IPMLLQRQED GYARLKRCIL IGDHHQLPPV VKNMAFQKYS HMDQSLFTRF
1201: VRLGIPYIEL NAQGRARPSL ARLYNWRYRE LGDLPYVKEN AVFHKANAGF SYDYQLVDVP DYNGRGESAP SPWFYQNEGE AEYIVSVYMY MRLLGYPANK
1301: ISILTTYNGQ KLLIRDVINR RCVPYDFIGP PHKVATVDKF QGQQNDFILL SLVRTRFVGH LRDVRRLIVA MSRARLGLYV FCRRSLFEQC YELQPTFRLL
1401: LERPDCLALN VEEATSLTNR PVGETGPVSV VSGPEEMQAI VNFKMHQVYQ ARMMSHIEYP AHPESVPEPS VEQNVMSLSH SMDSDKTAME DGTKDTGPSE
1501: SMESTKVPPD AGEMLVVGHS NGEVDGENQR VDSGELGTST GSIEAPHDDA EMLVASQSNG EADGKDQRVD RDGTDLENSS NVESKMEE
0001: MTKVYGTGTY DFKRHRVAEY PLELPSHPAE KPLESKPGSN LPSSITLSEI QQDRLTKIAE ESWIKTGGKL PEKPFDPEVV KEIYVTELKV TSGRKPVPLQ
0101: RVMILEVSQY LENYLWPNFD PETATFEHVM SMILMINEKF RENVAAWICF HDRDDLFKKF LQKVLRLKEG RDLTIAEKTN YLVFMINAFQ SLEDAVVNEI
0201: VLSLAGLQSW HSLSYGRFQM ELCLQPDLIK KWKRSSKKWA AEAKSKGEKF DLSSSPEANF VRGLIEEFVE VLDHGVFADE VDDTAGSQLV DDSSVLYCER
0301: FMEFLIDMLN QLPTRRYLRP LVADIAVVAK CRLSALYKHE KGKLFAQLVD LLQFYEKFEI KDHDGTQLTD DEALQFHYDR FMAFQLLAFK KIPKLQDLSL
0401: ANIGSIHKSS DLRRRLSVLS LEDLRDVVCS KLKLVSRHDP WADSKDFLTE VVVSSFEKQQ SQKEAINALP LYPNEQIMWD ESVIPSINYS GEGCLALPKL
0501: NLQFLTLHDY LLRNFNLFRL ESTYEIREDI QEAVPHLLAH INNEGDTAFR GWSRMAVPIN DFKIAQVKQP NIGEEKPSSV TAEVTFSIKS YRTQIRSEWN
0601: SLKEHDVLFL LCIRPSFEPL GPEEADKATV PQRLGLQYVR GCEIIDIRDE EGNLMNDFTG RVKRDEWKPP KGEMRTVTVA LDAAQYHIDV TDIAEKGAED
0701: VYGTFNVLMR RKPKENNFKA ILESIRDLMN EYCIVPEWLH NVFLGYGNPS AAQWPNMPNL LEIVDFKDTF LNANHLSESF SDYEVSFINA EGAEALDPSP
0801: PFRITLPKTL KGNGAISGNK ISEVNPADNV NMVDASPKEK LIVEAYTPPD PGPYPQDQPK QNSVKFTPTQ VGAIISGIQP GLTMVVGPPG TGKTDTAVQI
0901: LNVLYHNCPS QRTLIITHSN QALNDLFEKI MERDVPARYL LRLGQGEQEL ATDLDFSRQG RVNAMLVRRL ELLSEVERLA RSLQLPEDVG YTCETAGYFW
1001: LLHVYSRWEL FLAACAGNED NQSFVRDRFP FKDFFSDTPK PVFNGESFEK DMRAAKGCFS HLKTVFQELE ECRAFELLKS TADRANYLMT KQAKIVAMTC
1101: THAALKRRDF LQLGFKYDNL LMEESAQILE IETFIPMLLQ RQEDGHARLK RCILIGDHHQ LPPVVKNMAF QKYSHMDQSL FTRFVRLGIP YIELNAQGRA
1201: RPSLAKLYNW RYRDLGDLSI VKEAPIFQRA NAGFSYEYQL VNVPDYEGRG ESTPSPWFYQ NQGEAEYIVS VYIYMRLLGY PANKISILTT YNGQKLLIRD
1301: VINRRCVPYP FIGPPSKVTT VDKFQGQQND FILLSLVRTR FVGHLRDVRR LVVAMSRARL GLYVFCRRSL FEQCYELQPT FQLLLQRPDR LGLNFNENTA
1401: YTDRVVEEVE NSYLVHDVEE MAHIVDDRMN KFYQAQGAYE QYQNNMAQME DGNHDMESDS VVDGDESEKN MQQLNQSPDI DGELSKEVVG MEVDNNGFSS
1501: ENGKADEKN
0101: RVMILEVSQY LENYLWPNFD PETATFEHVM SMILMINEKF RENVAAWICF HDRDDLFKKF LQKVLRLKEG RDLTIAEKTN YLVFMINAFQ SLEDAVVNEI
0201: VLSLAGLQSW HSLSYGRFQM ELCLQPDLIK KWKRSSKKWA AEAKSKGEKF DLSSSPEANF VRGLIEEFVE VLDHGVFADE VDDTAGSQLV DDSSVLYCER
0301: FMEFLIDMLN QLPTRRYLRP LVADIAVVAK CRLSALYKHE KGKLFAQLVD LLQFYEKFEI KDHDGTQLTD DEALQFHYDR FMAFQLLAFK KIPKLQDLSL
0401: ANIGSIHKSS DLRRRLSVLS LEDLRDVVCS KLKLVSRHDP WADSKDFLTE VVVSSFEKQQ SQKEAINALP LYPNEQIMWD ESVIPSINYS GEGCLALPKL
0501: NLQFLTLHDY LLRNFNLFRL ESTYEIREDI QEAVPHLLAH INNEGDTAFR GWSRMAVPIN DFKIAQVKQP NIGEEKPSSV TAEVTFSIKS YRTQIRSEWN
0601: SLKEHDVLFL LCIRPSFEPL GPEEADKATV PQRLGLQYVR GCEIIDIRDE EGNLMNDFTG RVKRDEWKPP KGEMRTVTVA LDAAQYHIDV TDIAEKGAED
0701: VYGTFNVLMR RKPKENNFKA ILESIRDLMN EYCIVPEWLH NVFLGYGNPS AAQWPNMPNL LEIVDFKDTF LNANHLSESF SDYEVSFINA EGAEALDPSP
0801: PFRITLPKTL KGNGAISGNK ISEVNPADNV NMVDASPKEK LIVEAYTPPD PGPYPQDQPK QNSVKFTPTQ VGAIISGIQP GLTMVVGPPG TGKTDTAVQI
0901: LNVLYHNCPS QRTLIITHSN QALNDLFEKI MERDVPARYL LRLGQGEQEL ATDLDFSRQG RVNAMLVRRL ELLSEVERLA RSLQLPEDVG YTCETAGYFW
1001: LLHVYSRWEL FLAACAGNED NQSFVRDRFP FKDFFSDTPK PVFNGESFEK DMRAAKGCFS HLKTVFQELE ECRAFELLKS TADRANYLMT KQAKIVAMTC
1101: THAALKRRDF LQLGFKYDNL LMEESAQILE IETFIPMLLQ RQEDGHARLK RCILIGDHHQ LPPVVKNMAF QKYSHMDQSL FTRFVRLGIP YIELNAQGRA
1201: RPSLAKLYNW RYRDLGDLSI VKEAPIFQRA NAGFSYEYQL VNVPDYEGRG ESTPSPWFYQ NQGEAEYIVS VYIYMRLLGY PANKISILTT YNGQKLLIRD
1301: VINRRCVPYP FIGPPSKVTT VDKFQGQQND FILLSLVRTR FVGHLRDVRR LVVAMSRARL GLYVFCRRSL FEQCYELQPT FQLLLQRPDR LGLNFNENTA
1401: YTDRVVEEVE NSYLVHDVEE MAHIVDDRMN KFYQAQGAYE QYQNNMAQME DGNHDMESDS VVDGDESEKN MQQLNQSPDI DGELSKEVVG MEVDNNGFSS
1501: ENGKADEKN
Arabidopsis Description
EMB2765P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L5Y4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.