Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
26228564
|
msms PMID:
26228564
doi
Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G068900.2 | Wheat | cytosol | 29.21 | 98.49 |
| TraesCS4D01G155600.1 | Wheat | cytosol | 98.09 | 98.15 |
| HORVU4Hr1G035890.1 | Barley | cytosol | 95.98 | 94.71 |
| OQU92496 | Sorghum | cytosol | 80.8 | 83.74 |
| Os03t0387000-01 | Rice | cytosol, extracellular | 31.51 | 82.33 |
| Zm00001d029375_P002 | Maize | cytosol | 85.14 | 79.42 |
| CDX74890 | Canola | cytosol | 65.75 | 73.49 |
| CDX93302 | Canola | peroxisome | 65.11 | 72.82 |
| CDX91488 | Canola | cytosol | 68.81 | 71.98 |
| VIT_08s0056g01110.t01 | Wine grape | cytosol | 71.17 | 71.91 |
| Bra005086.1-P | Field mustard | cytosol | 68.81 | 71.89 |
| AT2G38770.1 | Thale cress | cytosol | 69.01 | 71.7 |
| VIT_13s0019g00880.t01 | Wine grape | cytosol | 70.85 | 71.59 |
| KRG89095 | Soybean | nucleus | 69.52 | 71.52 |
| KRH40912 | Soybean | nucleus | 68.94 | 70.84 |
| Solyc01g068480.2.1 | Tomato | nucleus | 69.52 | 68.64 |
| Bra017100.1-P | Field mustard | cytosol | 44.71 | 67.73 |
| GSMUA_Achr6P10430_001 | Banana | cytosol | 19.2 | 67.34 |
| CDX97748 | Canola | cytosol | 4.15 | 34.95 |
Protein Annotations
| MapMan:16.4.5.2.3 | Gene3D:3.40.50.300 | InterPro:Aquarius_N | InterPro:CWF11_fam | GO:GO:0000398 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005681 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016020 |
| InterPro:P-loop_NTPase | PFAM:PF13086 | PFAM:PF13087 | PFAM:PF16399 | PIRSF:PIRSF038901 | PANTHER:PTHR10887 |
| PANTHER:PTHR10887:SF5 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS4A01G149500 | EnsemblPlants:TraesCS4A01G149500.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr4A:+:286744191..286756220
Molecular Weight (calculated)
178692.0 Da
IEP (calculated)
5.378
GRAVY (calculated)
-0.361
Length
1568 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPKVYGTGVF EFRHPRAAEY PLPAEVSTSA APDKPPASTG VSITLLDIQR DRLTRAAAEH WGSPAAAAAF DADLVREIYA TELRVEGRGR KTVPLHRVMI
0101: LEVSQYLENY LWPHFDPDDA SFEHVMSMIL XXXXXFRENV AVWTSFHARK DAFKGFLWRV LKLKEEDRDV SMAEKTNYLL FMINAFQSLE DEIVRETILQ
0201: VVSLKLWHTL SFGRLQMELC LNPELIKKWT KIKRKEAKEG KKAGKTGNSS EMLENKFLRN LMEEFLEVLD SKVILSSQDG GEESVFNESL SGQVDNSSVL
0301: YCERFMEFLI DMLSQLPTRR FLRPLIADVA VVAKCHLSML YAHEKGRLFA QLVDLLQFYE GFEINDHSGT QLSDDDVLQA HYSRFQAFQL LAFKQVPKLR
0401: DLALCNIGSI HKRADLTKKL LVLSDMELQD LVCNKLKIIS EKDPWTERRD FLIEVLVAFF EKRQSQKDAV NALPLYPNEQ IMWDESLVPS INYSGEGCLA
0501: LPKLNLQFLT LHDYLLRNFN LFRLESTYEI REDIQEAVPH LHAYINNEGD TSFRGWSRMA VPIKEFRITQ VKQPNIGEVK PSAVTADVTF SISSYRPQIK
0601: SEWDALKEHD VLFLLSICPS FEPLSPEEAA KSTVSERLGL QYVRGCEVIE IRDEEGGLMN DYTGRVKRDE WKSPKGEIRT VKIALDTAQY HIDATELAEK
0701: GAENVYGTFN IIMRRKPKEN NFKAILESIR DLMNETCVVP EWLHNIFLGY GNPSAAQWIN MPDLLETIDF KDTFLDASHV VQSFPAFQVT FINTDGTENM
0801: HPSPPFRIKL SKKMREISHA LPGNVNASDT ASKNNMVDDE GSQKEKLRVE TYIPADPVPY PQDKPNQNSV RFTPTQVGAI ISGIQPGLTM VVGPPGTGKT
0901: DTAVQILNVL YHNCPSQRTL IITHSNQALN DLFEKIMQRD VPARYLLRLG QGEQELATDL DFSRQGRVNA MLVRRLELLG EVAKLARSLH LPEDVSYTCE
1001: NAAYFWLLHV YARWEQFLAA CVPNKENPSF VKDRFPFSEF FLDTPQPVFT GESFEKDMHA AKGCFKHLST IFQELEECRA FELLKSTAER ANYLMTKQAK
1101: IVAMTCTHAA LKRRDFLQLG FKYDNLLMEE SAQILEIETF IPTLLQRQED GYARLKRCIL IGDHHQLPPV VKNMAFQKYS HMDQSLFTRF VRLGVPYIEL
1201: NAQGRARPSI AQLYNWRYRE LGDLPYVHEE AIFHKANSGF SYEYQLVDVP DYRGRGESAP SPWFYQNEGE AEYIVSVYIY MRLIGYPANK ISILTTYNGQ
1301: KLLIRDVISR RCKPWNIEPP CKVTTVDKFQ GQQNDFILLS LVRTRFVGHL RDVRRLIVAM SRARLGLYVF CRRSLFEQCY ELQPTFQLLL QRPDKLALNL
1401: EECTPSTERP LGEAGNIHYI TDVEDIGHLV NFRLEHLRQM QSMQYYAPHA NADAAPPETG NGDIVLDNAK DGTEKENGEA TDAVNNDKME EDTVESKDDM
1501: VQEVNKMDEG NVTIEDKMGE ESADEAKDKM VETTAEVAIE NNIVEVNASV AKDKMDEENA VSKGVEQD
0101: LEVSQYLENY LWPHFDPDDA SFEHVMSMIL XXXXXFRENV AVWTSFHARK DAFKGFLWRV LKLKEEDRDV SMAEKTNYLL FMINAFQSLE DEIVRETILQ
0201: VVSLKLWHTL SFGRLQMELC LNPELIKKWT KIKRKEAKEG KKAGKTGNSS EMLENKFLRN LMEEFLEVLD SKVILSSQDG GEESVFNESL SGQVDNSSVL
0301: YCERFMEFLI DMLSQLPTRR FLRPLIADVA VVAKCHLSML YAHEKGRLFA QLVDLLQFYE GFEINDHSGT QLSDDDVLQA HYSRFQAFQL LAFKQVPKLR
0401: DLALCNIGSI HKRADLTKKL LVLSDMELQD LVCNKLKIIS EKDPWTERRD FLIEVLVAFF EKRQSQKDAV NALPLYPNEQ IMWDESLVPS INYSGEGCLA
0501: LPKLNLQFLT LHDYLLRNFN LFRLESTYEI REDIQEAVPH LHAYINNEGD TSFRGWSRMA VPIKEFRITQ VKQPNIGEVK PSAVTADVTF SISSYRPQIK
0601: SEWDALKEHD VLFLLSICPS FEPLSPEEAA KSTVSERLGL QYVRGCEVIE IRDEEGGLMN DYTGRVKRDE WKSPKGEIRT VKIALDTAQY HIDATELAEK
0701: GAENVYGTFN IIMRRKPKEN NFKAILESIR DLMNETCVVP EWLHNIFLGY GNPSAAQWIN MPDLLETIDF KDTFLDASHV VQSFPAFQVT FINTDGTENM
0801: HPSPPFRIKL SKKMREISHA LPGNVNASDT ASKNNMVDDE GSQKEKLRVE TYIPADPVPY PQDKPNQNSV RFTPTQVGAI ISGIQPGLTM VVGPPGTGKT
0901: DTAVQILNVL YHNCPSQRTL IITHSNQALN DLFEKIMQRD VPARYLLRLG QGEQELATDL DFSRQGRVNA MLVRRLELLG EVAKLARSLH LPEDVSYTCE
1001: NAAYFWLLHV YARWEQFLAA CVPNKENPSF VKDRFPFSEF FLDTPQPVFT GESFEKDMHA AKGCFKHLST IFQELEECRA FELLKSTAER ANYLMTKQAK
1101: IVAMTCTHAA LKRRDFLQLG FKYDNLLMEE SAQILEIETF IPTLLQRQED GYARLKRCIL IGDHHQLPPV VKNMAFQKYS HMDQSLFTRF VRLGVPYIEL
1201: NAQGRARPSI AQLYNWRYRE LGDLPYVHEE AIFHKANSGF SYEYQLVDVP DYRGRGESAP SPWFYQNEGE AEYIVSVYIY MRLIGYPANK ISILTTYNGQ
1301: KLLIRDVISR RCKPWNIEPP CKVTTVDKFQ GQQNDFILLS LVRTRFVGHL RDVRRLIVAM SRARLGLYVF CRRSLFEQCY ELQPTFQLLL QRPDKLALNL
1401: EECTPSTERP LGEAGNIHYI TDVEDIGHLV NFRLEHLRQM QSMQYYAPHA NADAAPPETG NGDIVLDNAK DGTEKENGEA TDAVNNDKME EDTVESKDDM
1501: VQEVNKMDEG NVTIEDKMGE ESADEAKDKM VETTAEVAIE NNIVEVNASV AKDKMDEENA VSKGVEQD
0001: MTKVYGTGTY DFKRHRVAEY PLELPSHPAE KPLESKPGSN LPSSITLSEI QQDRLTKIAE ESWIKTGGKL PEKPFDPEVV KEIYVTELKV TSGRKPVPLQ
0101: RVMILEVSQY LENYLWPNFD PETATFEHVM SMILMINEKF RENVAAWICF HDRDDLFKKF LQKVLRLKEG RDLTIAEKTN YLVFMINAFQ SLEDAVVNEI
0201: VLSLAGLQSW HSLSYGRFQM ELCLQPDLIK KWKRSSKKWA AEAKSKGEKF DLSSSPEANF VRGLIEEFVE VLDHGVFADE VDDTAGSQLV DDSSVLYCER
0301: FMEFLIDMLN QLPTRRYLRP LVADIAVVAK CRLSALYKHE KGKLFAQLVD LLQFYEKFEI KDHDGTQLTD DEALQFHYDR FMAFQLLAFK KIPKLQDLSL
0401: ANIGSIHKSS DLRRRLSVLS LEDLRDVVCS KLKLVSRHDP WADSKDFLTE VVVSSFEKQQ SQKEAINALP LYPNEQIMWD ESVIPSINYS GEGCLALPKL
0501: NLQFLTLHDY LLRNFNLFRL ESTYEIREDI QEAVPHLLAH INNEGDTAFR GWSRMAVPIN DFKIAQVKQP NIGEEKPSSV TAEVTFSIKS YRTQIRSEWN
0601: SLKEHDVLFL LCIRPSFEPL GPEEADKATV PQRLGLQYVR GCEIIDIRDE EGNLMNDFTG RVKRDEWKPP KGEMRTVTVA LDAAQYHIDV TDIAEKGAED
0701: VYGTFNVLMR RKPKENNFKA ILESIRDLMN EYCIVPEWLH NVFLGYGNPS AAQWPNMPNL LEIVDFKDTF LNANHLSESF SDYEVSFINA EGAEALDPSP
0801: PFRITLPKTL KGNGAISGNK ISEVNPADNV NMVDASPKEK LIVEAYTPPD PGPYPQDQPK QNSVKFTPTQ VGAIISGIQP GLTMVVGPPG TGKTDTAVQI
0901: LNVLYHNCPS QRTLIITHSN QALNDLFEKI MERDVPARYL LRLGQGEQEL ATDLDFSRQG RVNAMLVRRL ELLSEVERLA RSLQLPEDVG YTCETAGYFW
1001: LLHVYSRWEL FLAACAGNED NQSFVRDRFP FKDFFSDTPK PVFNGESFEK DMRAAKGCFS HLKTVFQELE ECRAFELLKS TADRANYLMT KQAKIVAMTC
1101: THAALKRRDF LQLGFKYDNL LMEESAQILE IETFIPMLLQ RQEDGHARLK RCILIGDHHQ LPPVVKNMAF QKYSHMDQSL FTRFVRLGIP YIELNAQGRA
1201: RPSLAKLYNW RYRDLGDLSI VKEAPIFQRA NAGFSYEYQL VNVPDYEGRG ESTPSPWFYQ NQGEAEYIVS VYIYMRLLGY PANKISILTT YNGQKLLIRD
1301: VINRRCVPYP FIGPPSKVTT VDKFQGQQND FILLSLVRTR FVGHLRDVRR LVVAMSRARL GLYVFCRRSL FEQCYELQPT FQLLLQRPDR LGLNFNENTA
1401: YTDRVVEEVE NSYLVHDVEE MAHIVDDRMN KFYQAQGAYE QYQNNMAQME DGNHDMESDS VVDGDESEKN MQQLNQSPDI DGELSKEVVG MEVDNNGFSS
1501: ENGKADEKN
0101: RVMILEVSQY LENYLWPNFD PETATFEHVM SMILMINEKF RENVAAWICF HDRDDLFKKF LQKVLRLKEG RDLTIAEKTN YLVFMINAFQ SLEDAVVNEI
0201: VLSLAGLQSW HSLSYGRFQM ELCLQPDLIK KWKRSSKKWA AEAKSKGEKF DLSSSPEANF VRGLIEEFVE VLDHGVFADE VDDTAGSQLV DDSSVLYCER
0301: FMEFLIDMLN QLPTRRYLRP LVADIAVVAK CRLSALYKHE KGKLFAQLVD LLQFYEKFEI KDHDGTQLTD DEALQFHYDR FMAFQLLAFK KIPKLQDLSL
0401: ANIGSIHKSS DLRRRLSVLS LEDLRDVVCS KLKLVSRHDP WADSKDFLTE VVVSSFEKQQ SQKEAINALP LYPNEQIMWD ESVIPSINYS GEGCLALPKL
0501: NLQFLTLHDY LLRNFNLFRL ESTYEIREDI QEAVPHLLAH INNEGDTAFR GWSRMAVPIN DFKIAQVKQP NIGEEKPSSV TAEVTFSIKS YRTQIRSEWN
0601: SLKEHDVLFL LCIRPSFEPL GPEEADKATV PQRLGLQYVR GCEIIDIRDE EGNLMNDFTG RVKRDEWKPP KGEMRTVTVA LDAAQYHIDV TDIAEKGAED
0701: VYGTFNVLMR RKPKENNFKA ILESIRDLMN EYCIVPEWLH NVFLGYGNPS AAQWPNMPNL LEIVDFKDTF LNANHLSESF SDYEVSFINA EGAEALDPSP
0801: PFRITLPKTL KGNGAISGNK ISEVNPADNV NMVDASPKEK LIVEAYTPPD PGPYPQDQPK QNSVKFTPTQ VGAIISGIQP GLTMVVGPPG TGKTDTAVQI
0901: LNVLYHNCPS QRTLIITHSN QALNDLFEKI MERDVPARYL LRLGQGEQEL ATDLDFSRQG RVNAMLVRRL ELLSEVERLA RSLQLPEDVG YTCETAGYFW
1001: LLHVYSRWEL FLAACAGNED NQSFVRDRFP FKDFFSDTPK PVFNGESFEK DMRAAKGCFS HLKTVFQELE ECRAFELLKS TADRANYLMT KQAKIVAMTC
1101: THAALKRRDF LQLGFKYDNL LMEESAQILE IETFIPMLLQ RQEDGHARLK RCILIGDHHQ LPPVVKNMAF QKYSHMDQSL FTRFVRLGIP YIELNAQGRA
1201: RPSLAKLYNW RYRDLGDLSI VKEAPIFQRA NAGFSYEYQL VNVPDYEGRG ESTPSPWFYQ NQGEAEYIVS VYIYMRLLGY PANKISILTT YNGQKLLIRD
1301: VINRRCVPYP FIGPPSKVTT VDKFQGQQND FILLSLVRTR FVGHLRDVRR LVVAMSRARL GLYVFCRRSL FEQCYELQPT FQLLLQRPDR LGLNFNENTA
1401: YTDRVVEEVE NSYLVHDVEE MAHIVDDRMN KFYQAQGAYE QYQNNMAQME DGNHDMESDS VVDGDESEKN MQQLNQSPDI DGELSKEVVG MEVDNNGFSS
1501: ENGKADEKN
Arabidopsis Description
EMB2765P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L5Y4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.