Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400079921 | Potato | cytosol | 98.6 | 98.34 |
| VIT_13s0320g00070.t01 | Wine grape | cytosol | 80.28 | 80.85 |
| KRH13822 | Soybean | cytosol | 77.15 | 76.33 |
| KXG37557 | Sorghum | cytosol | 73.9 | 74.42 |
| AT2G31900.2 | Thale cress | cytosol | 73.45 | 73.92 |
| TraesCS5B01G391400.2 | Wheat | cytosol | 73.45 | 73.88 |
| TraesCS5A01G386500.1 | Wheat | cytosol | 73.32 | 73.84 |
| HORVU5Hr1G094780.46 | Barley | cytosol | 73.26 | 73.73 |
| TraesCS5D01G396300.1 | Wheat | cytosol | 73.39 | 73.72 |
| CDX84752 | Canola | cytosol | 73.32 | 73.61 |
| CDX79446 | Canola | cytosol | 73.01 | 73.47 |
| KRH43634 | Soybean | cytosol | 77.6 | 73.43 |
| GSMUA_Achr3P30890_001 | Banana | cytosol | 75.3 | 73.29 |
| Zm00001d013276_P005 | Maize | cytosol | 71.92 | 72.38 |
| GSMUA_Achr4P07570_001 | Banana | plastid | 73.58 | 72.38 |
| Solyc07g041150.2.1 | Tomato | nucleus | 63.62 | 65.21 |
| Solyc06g008530.1.1 | Tomato | cytosol | 62.92 | 64.53 |
| Solyc08g061520.2.1 | Tomato | cytosol | 19.08 | 64.44 |
| Solyc09g064200.2.1 | Tomato | plastid | 62.16 | 64.33 |
| Solyc11g006220.1.1 | Tomato | cytosol, extracellular | 61.97 | 63.63 |
| Solyc06g008090.2.1 | Tomato | cytosol | 59.29 | 62.6 |
| Solyc06g083960.1.1 | Tomato | cytosol | 43.59 | 59.96 |
| Solyc09g091080.2.1 | Tomato | cytosol | 57.37 | 55.29 |
| Bra022871.1-P | Field mustard | cytosol | 73.45 | 52.1 |
| Solyc08g061500.1.1 | Tomato | cytosol | 30.12 | 45.3 |
| Solyc02g020910.2.1 | Tomato | nucleus | 24.7 | 33.45 |
| Solyc07g063590.2.1 | Tomato | cytosol | 23.23 | 30.64 |
| Solyc10g006820.2.1 | Tomato | cytosol | 23.04 | 30.01 |
Protein Annotations
| Gene3D:1.10.10.820 | Gene3D:1.20.120.720 | Gene3D:1.20.5.190 | Gene3D:1.20.58.530 | MapMan:20.2.4.1 | Gene3D:3.30.70.3240 |
| Gene3D:3.40.850.10 | ncoils:Coil | InterPro:Dilute_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003777 | GO:GO:0003779 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0007015 | GO:GO:0007018 |
| GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016459 | GO:GO:0016787 |
| InterPro:IPR000048 | InterPro:IPR001609 | InterPro:IPR002710 | InterPro:IPR004009 | InterPro:IPR036961 | InterPro:IQ_motif_EF-hand-BS |
| UniProt:K4AY46 | InterPro:Kinesin_motor_dom_sf | InterPro:MYSc_Myo11 | InterPro:MyosinXI_CBD | InterPro:Myosin_N | InterPro:Myosin_head_motor_dom |
| InterPro:P-loop_NTPase | PFAM:PF00063 | PFAM:PF00612 | PFAM:PF01843 | PFAM:PF02736 | PRINTS:PR00193 |
| PFscan:PS50096 | PFscan:PS51126 | PFscan:PS51456 | PFscan:PS51844 | PANTHER:PTHR13140 | PANTHER:PTHR13140:SF270 |
| SMART:SM00015 | SMART:SM00242 | SMART:SM01132 | SUPFAM:SSF52540 | EnsemblPlantsGene:Solyc01g081540.2 | EnsemblPlants:Solyc01g081540.2.1 |
| UniParc:UPI0002762B84 | SEG:seg | : | : | : | : |
Description
Myosin-12 [Source:Projected from Arabidopsis thaliana (AT2G31900) UniProtKB/Swiss-Prot;Acc:F4IRU3]
Coordinates
chr1:-:80728907..80740974
Molecular Weight (calculated)
177906.0 Da
IEP (calculated)
7.713
GRAVY (calculated)
-0.458
Length
1567 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGTPVNIIVG SQVWIEDPDD AWIDGEVTEI KGSNATVATT NGKTTVASIS SIYPKDTEAP PSGVDDMTKL AYLHEPGVLN NLACRYSLNE IYTYTGNILI
0101: AVNPFRRLPH LYDTHMMQQY KGAPFGELSP HLFAVADACY RALINEHGNQ SILVSGESGA GKTETTKMLM RYLAFMGGRS GTEGRTVEQQ VLESNPVLEA
0201: FGNAKTVKNN NSSRFGKFVE IQFDKHAKIS GAAVRTYLLE RSRVCQVSDP ERNYHCFYML CAAPPEDVKR FKLGNPKTFH YLNQSNCYEV ANVDDAREYL
0301: ETRNAMDVVG IGQEEQDAIF RVVAAILHLG NINFVKGKEA DSSKLKDEKS LFHLKTAAEL FMCDEKALED SLCKRVIVTP DGNITKLLDP AAATTSRDAL
0401: AKTVYSRLFD WLVDKINSSI GQDPEAKSII GVLDIYGFES FKINSFEQFC INLTNEKLQQ HFNQHVFKME QDDYTTEEIN WSYVEFVDNQ DVLDLIEKKP
0501: GGIIALLDEA CMFPKATHET FAQKMYQTYR AHKRFSKPKL ARTDFTINHY AGDVTYQADH FLDKNKDYVI AEFQALLMDS KCSFIANLFP PLPEESSKQS
0601: KFSSIGTRFK QQLQSLMETL NTTEPHYIRC VKPNTVLKPG IFENMNVLNQ LRCGGVLEAI RISCAGYPTK RTFDEFLDRF GTLAPDVLDG CDEKSACIAI
0701: CDRMGLKGYQ IGKTKVFLRA GQMAELDARR TEVLAHAAKR IQRQIRTYLT RKEFIALKRA TIHFQKLWRA QLARVLYEQM KREAASIRIQ KHARSHSARK
0801: SYKELQAAAV VIQTGMRAMA ARNEYRQRRR NKAAKIVQTQ WRGFHAFSTY KQKKKASLSL QCLWRGRLAR KVLRKLRMDA RDTGALKEAK DKLEKRVEEL
0901: TWRLDFEKHL RTDLEEAKGQ EISKLQKALQ EMQMQLDEAH DAIIHEKEAA KIAIEQAPPV IKEVPVIDNT KVEKLTDENN KLEDEIRELK KRVEDFEQSY
1001: NEVEKECQAT RKEAEESQLR VSELQESIER LQLNLSNLES ENQVLRQQAL VASTNEALSE EMDILKNKIK DLESENELLR TQRVVVERVV SSDDRAPKGL
1101: ETVDITHPAD NGHQTEEVHE EMKVEQQISK DSSPPISLTK QRSLTDRQQE NHDILIKCLA EDKRFDKGRP VAACTLYKAL LQWRSFEAEK TNIFDRIIHT
1201: IRSSIEDQDN TSDLAYWLST SSTLLFLLQS TIKAGNAPTR SPYRNRSSPT TLFGRMAQGF RSTSLSMAIS SGYSGIEGSP NVRTRIEAKY PALLFKQHLT
1301: ACVEKIYGMI RDNLKKEISP FLNQCIHAPR SARIKPLKGS SRSIHSNIIA KQQASSVHWQ NIVNSLDNTL TILSENNVPS TITRKILSQV FSYINVQLFN
1401: SLLLRRECCS FSNGEYLKAG LQELESWCSK ATEQYAGSSW DELQHIRQAV GFLVLHQKSQ KALDEITSDL CPMLSIAQIY RIGTMFWDDK YGAHGLSPEV
1501: IGKMRALTLE DSASIPNNTF LLDVDSSIPF SIEEISRSFQ SINLSDVEPP PLLRQRSDFQ FLLQAAA
0101: AVNPFRRLPH LYDTHMMQQY KGAPFGELSP HLFAVADACY RALINEHGNQ SILVSGESGA GKTETTKMLM RYLAFMGGRS GTEGRTVEQQ VLESNPVLEA
0201: FGNAKTVKNN NSSRFGKFVE IQFDKHAKIS GAAVRTYLLE RSRVCQVSDP ERNYHCFYML CAAPPEDVKR FKLGNPKTFH YLNQSNCYEV ANVDDAREYL
0301: ETRNAMDVVG IGQEEQDAIF RVVAAILHLG NINFVKGKEA DSSKLKDEKS LFHLKTAAEL FMCDEKALED SLCKRVIVTP DGNITKLLDP AAATTSRDAL
0401: AKTVYSRLFD WLVDKINSSI GQDPEAKSII GVLDIYGFES FKINSFEQFC INLTNEKLQQ HFNQHVFKME QDDYTTEEIN WSYVEFVDNQ DVLDLIEKKP
0501: GGIIALLDEA CMFPKATHET FAQKMYQTYR AHKRFSKPKL ARTDFTINHY AGDVTYQADH FLDKNKDYVI AEFQALLMDS KCSFIANLFP PLPEESSKQS
0601: KFSSIGTRFK QQLQSLMETL NTTEPHYIRC VKPNTVLKPG IFENMNVLNQ LRCGGVLEAI RISCAGYPTK RTFDEFLDRF GTLAPDVLDG CDEKSACIAI
0701: CDRMGLKGYQ IGKTKVFLRA GQMAELDARR TEVLAHAAKR IQRQIRTYLT RKEFIALKRA TIHFQKLWRA QLARVLYEQM KREAASIRIQ KHARSHSARK
0801: SYKELQAAAV VIQTGMRAMA ARNEYRQRRR NKAAKIVQTQ WRGFHAFSTY KQKKKASLSL QCLWRGRLAR KVLRKLRMDA RDTGALKEAK DKLEKRVEEL
0901: TWRLDFEKHL RTDLEEAKGQ EISKLQKALQ EMQMQLDEAH DAIIHEKEAA KIAIEQAPPV IKEVPVIDNT KVEKLTDENN KLEDEIRELK KRVEDFEQSY
1001: NEVEKECQAT RKEAEESQLR VSELQESIER LQLNLSNLES ENQVLRQQAL VASTNEALSE EMDILKNKIK DLESENELLR TQRVVVERVV SSDDRAPKGL
1101: ETVDITHPAD NGHQTEEVHE EMKVEQQISK DSSPPISLTK QRSLTDRQQE NHDILIKCLA EDKRFDKGRP VAACTLYKAL LQWRSFEAEK TNIFDRIIHT
1201: IRSSIEDQDN TSDLAYWLST SSTLLFLLQS TIKAGNAPTR SPYRNRSSPT TLFGRMAQGF RSTSLSMAIS SGYSGIEGSP NVRTRIEAKY PALLFKQHLT
1301: ACVEKIYGMI RDNLKKEISP FLNQCIHAPR SARIKPLKGS SRSIHSNIIA KQQASSVHWQ NIVNSLDNTL TILSENNVPS TITRKILSQV FSYINVQLFN
1401: SLLLRRECCS FSNGEYLKAG LQELESWCSK ATEQYAGSSW DELQHIRQAV GFLVLHQKSQ KALDEITSDL CPMLSIAQIY RIGTMFWDDK YGAHGLSPEV
1501: IGKMRALTLE DSASIPNNTF LLDVDSSIPF SIEEISRSFQ SINLSDVEPP PLLRQRSDFQ FLLQAAA
0001: MGTPVNITLG SHVWVEDPEL AWISGEVTEI KGTNAKIVTA NGKTVVASIS SIYPKDTEAP PAGVDDMTKL AYLHEPGVLH NLDCRFALNE IYTYTGNILI
0101: AVNPFQRLPH LYSVHMMEQY KGAAFGELSP HLFAVADTSY RAMINEARSQ SILVSGESGA GKTETTKMLM RYLAFMGGRS DTEGRSVEQQ VLESNPVLEA
0201: FGNAKTVKNN NSSRFGKFVE IQFDKRGKIS GAAIRTYLLE RSRVCQVSDP ERNYHCFYML CAAPPEEAKK FKVGDPRTFH YLNQTNCYEV SNVDDAREYL
0301: ETRNAMDIVG IGQEAQDAIF RVVAAILHLG NVNFIKGEEA DSSKLRDDKS RYHLQTAAEL LMCNEKMMED SLCKRVIVTP DGNITKPLDP ESAASNRDAL
0401: AKTVYSRLFD WIVDKINSSI GQDPDAKSLI GVLDIYGFES FKINSFEQLC INLTNEKLQQ HFNQHVFKME QEEYTREEIN WSYVEFVDNQ DVLDLIEKKP
0501: GGIIALLDEA CMFPKSTHET FAQKMYQTYK GHKRFSKPKL AQTAFTVNHY AGDVTYSAEQ FLDKNKDYVV AEHQALLDAS KCSFVANLFP PLPEDASKQS
0601: KFSSIGTRFK QQLQALMETL NTTEPHYIRC VKPNAVLKPG IFENDNVLNQ LRCGGVLEAI RISCAGYPTK RAFDEFLDRF VMLATDVPEG SDEKSACASI
0701: CNKMGLKGYQ IGKTKIFLRA GQMAELDARR TEVLAGATKL IQRQIRTYLT RKEFLGQKRA TIYMQKLWRA KLARKLYQNM RREAASICIQ KNIRAHRARK
0801: NYTKLQASAT VIQTGLRTMS ARNKHRHRRR TKAAIIIQRE WRRHQVHEAY KKHKKATLAL QCLWRAKVAR KELKNLRMAA RETGALKEAK DKLEKRVEEL
0901: TWRLELEKNQ KADLEDAKAQ EIAKLQNNLT ELQEKLDEAY AAIIRDKEAA KLAIEQAPPI IKEVPVVDNT QLELLNSQNN ELEVEVAKLK GKIKEFEVKC
1001: FALENDSRAS VTEAEDAKSK AVEFQEIIER LHTNLSNLES ENQVLRQQAL AASTSVEEIG ELNSLKDKVA ILESENETLR RQTESAEKTM PPARVFASEK
1101: NLENEHQTKE IQATKEPRNP INVLAKQGSL TDRQQESHEV LMKCLTDERR FDNEKSVAAW IVYKALLQWR LFEAEKTNIF DRIVHKIRSS IEGQDDTREL
1201: AYWLTTSSTL LYLLQSTLKF SNTNNAASRR NRSSHATLFG RLVQGMQPSS VGLETSSGYS GMAGIPNDQQ MVEAKYPALL FKQHLAAYVE KTYGMIRDKL
1301: KKEINPLLNL CIHAPRPTRA KTLRDVTKSI HLTTIAKQQA SYVQWQNIVN KLEHTLTFMA ENHVPSMITR KLFHQVFSYI NVQLFNSLLL RRECCSVSNG
1401: EYLKMGLHEL EQWCLKADDE ATRSPWDELQ HIRQAVMFLV SHQKTQKSLD EIAKEICPVL SIPQVYRIGT MFWDDKYGTQ GLSPEVINQM RKLMTEDSAN
1501: MTYPSFLLDV DSSIPFSVED VSQSFHGGNI SLSDVDPSPL LRQRSDFHFL FQTLPE
0101: AVNPFQRLPH LYSVHMMEQY KGAAFGELSP HLFAVADTSY RAMINEARSQ SILVSGESGA GKTETTKMLM RYLAFMGGRS DTEGRSVEQQ VLESNPVLEA
0201: FGNAKTVKNN NSSRFGKFVE IQFDKRGKIS GAAIRTYLLE RSRVCQVSDP ERNYHCFYML CAAPPEEAKK FKVGDPRTFH YLNQTNCYEV SNVDDAREYL
0301: ETRNAMDIVG IGQEAQDAIF RVVAAILHLG NVNFIKGEEA DSSKLRDDKS RYHLQTAAEL LMCNEKMMED SLCKRVIVTP DGNITKPLDP ESAASNRDAL
0401: AKTVYSRLFD WIVDKINSSI GQDPDAKSLI GVLDIYGFES FKINSFEQLC INLTNEKLQQ HFNQHVFKME QEEYTREEIN WSYVEFVDNQ DVLDLIEKKP
0501: GGIIALLDEA CMFPKSTHET FAQKMYQTYK GHKRFSKPKL AQTAFTVNHY AGDVTYSAEQ FLDKNKDYVV AEHQALLDAS KCSFVANLFP PLPEDASKQS
0601: KFSSIGTRFK QQLQALMETL NTTEPHYIRC VKPNAVLKPG IFENDNVLNQ LRCGGVLEAI RISCAGYPTK RAFDEFLDRF VMLATDVPEG SDEKSACASI
0701: CNKMGLKGYQ IGKTKIFLRA GQMAELDARR TEVLAGATKL IQRQIRTYLT RKEFLGQKRA TIYMQKLWRA KLARKLYQNM RREAASICIQ KNIRAHRARK
0801: NYTKLQASAT VIQTGLRTMS ARNKHRHRRR TKAAIIIQRE WRRHQVHEAY KKHKKATLAL QCLWRAKVAR KELKNLRMAA RETGALKEAK DKLEKRVEEL
0901: TWRLELEKNQ KADLEDAKAQ EIAKLQNNLT ELQEKLDEAY AAIIRDKEAA KLAIEQAPPI IKEVPVVDNT QLELLNSQNN ELEVEVAKLK GKIKEFEVKC
1001: FALENDSRAS VTEAEDAKSK AVEFQEIIER LHTNLSNLES ENQVLRQQAL AASTSVEEIG ELNSLKDKVA ILESENETLR RQTESAEKTM PPARVFASEK
1101: NLENEHQTKE IQATKEPRNP INVLAKQGSL TDRQQESHEV LMKCLTDERR FDNEKSVAAW IVYKALLQWR LFEAEKTNIF DRIVHKIRSS IEGQDDTREL
1201: AYWLTTSSTL LYLLQSTLKF SNTNNAASRR NRSSHATLFG RLVQGMQPSS VGLETSSGYS GMAGIPNDQQ MVEAKYPALL FKQHLAAYVE KTYGMIRDKL
1301: KKEINPLLNL CIHAPRPTRA KTLRDVTKSI HLTTIAKQQA SYVQWQNIVN KLEHTLTFMA ENHVPSMITR KLFHQVFSYI NVQLFNSLLL RRECCSVSNG
1401: EYLKMGLHEL EQWCLKADDE ATRSPWDELQ HIRQAVMFLV SHQKTQKSLD EIAKEICPVL SIPQVYRIGT MFWDDKYGTQ GLSPEVINQM RKLMTEDSAN
1501: MTYPSFLLDV DSSIPFSVED VSQSFHGGNI SLSDVDPSPL LRQRSDFHFL FQTLPE
Arabidopsis Description
XIFmyosin-like protein XIF [Source:TAIR;Acc:AT2G31900]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.