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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400049643 Potato cytosol 47.14 94.59
KRH13051 Soybean cytosol 15.57 69.03
Solyc10g006820.2.1 Tomato cytosol 67.26 66.42
VIT_19s0014g03640.t01 Wine grape cytosol 61.7 61.24
KRH22163 Soybean cytosol 59.18 58.78
KRH27175 Soybean cytosol 58.75 58.31
KRH55425 Soybean cytosol 55.72 56.39
KRH26031 Soybean cytosol 55.56 55.93
CDY52239 Canola cytosol 56.31 55.89
AT5G54280.2 Thale cress cytosol 57.15 55.66
CDY28777 Canola cytosol 56.06 55.55
Bra022708.1-P Field mustard cytosol 56.23 55.16
Bra002998.1-P Field mustard cytosol, plastid 55.81 55.02
CDY14319 Canola cytosol, plastid 55.72 54.94
CDY18321 Canola cytosol 55.56 54.68
AT4G27370.2 Thale cress cytosol 50.51 52.82
Solyc02g020910.2.1 Tomato nucleus 50.0 51.34
EER99532 Sorghum cytosol 51.85 49.76
Zm00001d006593_P003 Maize cytosol 51.85 49.64
Os07t0562800-01 Rice plasma membrane 51.94 49.28
TraesCS2A01G204700.1 Wheat cytosol, plastid 52.36 49.25
TraesCS2B01G232300.1 Wheat cytosol, endoplasmic reticulum 52.53 49.06
TraesCS2D01G211200.5 Wheat cytosol, endoplasmic reticulum 52.27 48.9
Bra031394.1-P Field mustard cytosol 27.53 48.37
Zm00001d021785_P002 Maize cytosol, plastid 48.15 48.15
Bra026355.1-P Field mustard cytosol 48.23 46.06
GSMUA_Achr8P03790_001 Banana cytosol 51.68 45.35
Solyc08g061520.2.1 Tomato cytosol 16.16 41.38
Solyc06g083960.1.1 Tomato cytosol 30.22 31.52
Solyc09g064200.2.1 Tomato plastid 32.07 25.17
Solyc06g008530.1.1 Tomato cytosol 32.32 25.13
Solyc11g006220.1.1 Tomato cytosol, extracellular 32.15 25.03
Solyc07g041150.2.1 Tomato nucleus 32.07 24.92
Solyc06g008090.2.1 Tomato cytosol 30.3 24.26
Solyc01g081540.2.1 Tomato nucleus 30.64 23.23
Solyc09g091080.2.1 Tomato cytosol 31.23 22.82
Solyc08g061500.1.1 Tomato cytosol 13.47 15.36
Protein Annotations
Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.58.530Gene3D:2.30.30.360MapMan:20.2.4.2Gene3D:3.30.70.3240
Gene3D:3.40.850.10ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777
GO:GO:0003779GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005856GO:GO:0007018GO:GO:0008017GO:GO:0008150
GO:GO:0009987GO:GO:0016459GO:GO:0016787GO:GO:0051015InterPro:IPR000048InterPro:IPR001609
InterPro:IPR004009InterPro:IPR008989InterPro:IPR036961InterPro:IQ_motif_EF-hand-BSUniProt:K4CH42InterPro:Kinesin_motor_dom_sf
InterPro:MYSc_Myo8InterPro:Myosin_NInterPro:Myosin_S1_NInterPro:Myosin_head_motor_domInterPro:P-loop_NTPasePFAM:PF00063
PFAM:PF00612PFAM:PF02736PRINTS:PR00193PFscan:PS50096PFscan:PS51456PFscan:PS51844
PANTHER:PTHR13140PANTHER:PTHR13140:SF702SMART:SM00015SMART:SM00242SUPFAM:SSF52540EnsemblPlantsGene:Solyc07g063590.2
EnsemblPlants:Solyc07g063590.2.1UniParc:UPI000276BE51SEG:seg:::
Description
No Description!
Coordinates
chr7:+:66028119..66038581
Molecular Weight (calculated)
134657.0 Da
IEP (calculated)
8.866
GRAVY (calculated)
-0.522
Length
1188 amino acids
Sequence
(BLAST)
0001: MSRFKENGGK LMSTIVRSSL EEMLDSLRQR DENEKPKDLP PALPARPKLT SRTRPPSQRQ PLSKRLSKGD VELENGKKKE ELKVLKRNVF GAMKVKGIED
0101: SESPYAMPSV KKNSTGRLRE VNGGKVEKWR SEAEWDDRLD YFVKKKLRIW CRLGNGAWVS GHIQSTSGGK AMVLLSDGSV VTVPVGEVLP SNPDVLEGVD
0201: DLMQLSYLNE PSVLHNLQHR YARDMIYSKA GPVLIAINPF KDIQLYGNEF VTAYRQKLLS DPHVYSIADS AYDRMMEDEI SQSIIISGES GSGKTETAKF
0301: AMEYLAMLGG GSNGIEKEVL QTSYILEAFG NAKTSRNNNS SRFGKLVEIH FSPAGRICGA KIQTLILEKS RVVQLLDGER SYHIFYQLCA GAPPTLRDKL
0401: KLKGASEYKY LNQSGCLVIH DVDDAEEFCK LMEALNTVRI SERDQEHAFQ MIASVLWLGN ITFQVIDDES RAEVVQSEAV TNAASLIGCT VNDLILALST
0501: CQIRAGKDKI AKSLTVEQAT DRRDALAKFI YANLFDWIVD QMNRNLAMDK EQMGRSINIL DIYGFESFQG NSFEQFLINY ANERLQQHAN RHLLKLEQEE
0601: YELDGIDWSK VDFEDNQECL NLFEKKPIGL ISLLNEESNS LTATDLTFVC KLKQHIKSSP CFKSEREEFC IRHYAGEVTY DATGFLAKNR DVLHPDITQL
0701: LSSSDSHLPE DKKLSIPSTD AGVLDFQKQS VATKFKDNLF KLMQQLENTI PHFICCIKPN NKQLPGMSDK DLVIEQLRCC GVLEVVRISR SGYPTRLTHQ
0801: EFTSRYGFLL PKDSACQDPL SMSVAILHQF GILPELYQVG YTKLYFRSGQ IASLEDARNQ VLQGTLELQK CFRGHRARRH FHELKGGVII LQSFIRGEIE
0901: RRLYNTKVMS KAKVAREGSD EQLVAVVQIQ SAIRGWLARR GLRKLRNSKM LNVDKRRSGR KTEVKELPRE ILPSVVEDLE RRVAKAEATT EQKEKENAAL
1001: KEQVNQFETR CLEYEVKMRS MEEMWQKQMT SLQVSLAAAR NSLTAADTTG RPGKLEGSPS PQYYDSDDAT SMDTPAGRTP VSFSNNSLGV VANREVNGGL
1101: SLISHLAMEF EQRKQNFDNE AMAIVHLKPG QLQSTNNPAD EYRRLKHRFE EWKKEYKVRL KETKSKVHKL VHSKAGKSRR KWWGKKSK
Best Arabidopsis Sequence Match ( AT5G54280.2 )
(BLAST)
0001: MMLSASPNTL AKSSLEEMLE SLRQKDECDR PKDMPPALPS RPNSRARLPS ARRSLPANFN VSSVMEDQNG SVVSVTPAVE AESERKEEGV KRKEKDLGVK
0101: RNSFGSKKMR TGLRSESPYA AEKEEEGVKI SIAKVSLVEN TEEHNKPESE WNNNVEYFIK KKLRVWCRVS NGQWQLGKIQ STSADTSLVM LSTANVVKVS
0201: TEELFPANPD ILEGVEDLIQ LSYLNEPSVL YNLRVRYLQD VIYSKAGPVL IAVNPFKNVE IYGNDVISAY QKKVMDAPHV YAVADAAYDE MMREEKNQSL
0301: IISGESGAGK TETAKFAMQY LAALGGGSCG VEYEILKTTC ILEAFGNAKT SRNANSSRFG KLIEIHFSAM GKICGAKLET FLLEKSRVVQ LFNGERSYHI
0401: FYELCAGASP ILKERLKLKT ASEYTYLSQS DCLTIAGVDD AQKFHKLLEA FDIVQIPKEH QERAFALLAA VLWLGNVSFR VTDNENHVEV VADEAVANAA
0501: MLMGCNTEEL MVVLSTRKLQ AGTDCIAKKL TLRQATDMRD GIAKFIYANL FDWLVEQINI ALEVGKSRTG RSISILDIYG FESFKNNSFE QFCINYANER
0601: LQQHFNRHLF KLEQEEYEED GIDWTKVEFV DNQECLDLIE KKPIGLLSLL DEESNFPKAT DLTFANKLKQ HLKTNSCFKG ERGRAFRVNH YAGEVLYDTN
0701: GFLEKNRDPL PADLINLLSS CDCQLLKLFS TKMRGKSQKP LMLSDSTNQT VGTKFKGQLF KLMNKLENTS PHFIRCIKPN SKQLPRVYEE DLVLQQLRCC
0801: GVLEVVRISR SGYPTRLTHQ EFAGRYGFLL SDKKVAQDPL SVSIAVLKQY DVHPEMYQVG YTKLYLRTGQ IGIFEDRRKK VLQGIVGLQK HFRGHLSRAY
0901: FQNMRKVTLV LQSYIRGENA RRLFDTEAKF HADSVSEAST DELSAVIHLQ SAVRGWLARK HFNSMQRQKE LRNVATKSKR KAGRRISEDK DIPLEQPQVQ
1001: PTSMSDLQKR ILKSEAALSQ KEEENTALRE QLRQFEERWS EYDIKMKSME ETWQKQMSSL QMSLAAARKS LAAESITGQA GGRQDTSISP FGYDSEDTMS
1101: TGTPGVRTPT NKFTNGNTPE LRIRELNGSL NAVNHLAREF DQRRLNFDED ARAIVEVKLG PQATPNGQQQ QHPEDEFRRL KLRFETWKKD YKARLRDTKA
1201: RLHRVDGDKG RHRKWWGKRG
Arabidopsis Description
VIII-2Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:F4K0A6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.