Factsheet for AT4G27370.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031394.1-P	Field mustard	cytosol	44.98	75.59
KRH13051	Soybean	cytosol	17.17	72.76
Bra026355.1-P	Field mustard	cytosol	74.74	68.25
AT5G54280.2	Thale cress	cytosol	69.37	64.59
KRH22163	Soybean	cytosol	59.77	56.77
KRH27175	Soybean	cytosol	59.68	56.64
VIT_19s0014g03640.t01	Wine grape	cytosol	57.31	54.39
KRH55425	Soybean	cytosol	55.63	53.83
KRH26031	Soybean	cytosol	55.55	53.47
AT1G50360.1	Thale cress	cytosol	52.02	51.26
Solyc07g063590.2.1	Tomato	cytosol	52.82	50.51
AT3G19960.2	Thale cress	cytosol, plastid	50.53	48.81
EER99532	Sorghum	cytosol	53.08	48.71
PGSC0003DMT400049643	Potato	cytosol	25.0	47.97
Solyc10g006820.2.1	Tomato	cytosol	50.79	47.96
Zm00001d006593_P003	Maize	cytosol	52.38	47.95
Os07t0562800-01	Rice	plasma membrane	52.2	47.36
TraesCS2D01G211200.5	Wheat	cytosol, endoplasmic reticulum	51.94	46.46
TraesCS2B01G232300.1	Wheat	cytosol, endoplasmic reticulum	51.94	46.38
TraesCS2A01G204700.1	Wheat	cytosol, plastid	51.5	46.32
Zm00001d021785_P002	Maize	cytosol, plastid	47.89	45.79
GSMUA_Achr8P03790_001	Banana	cytosol	52.99	44.46
AT3G58160.1	Thale cress	cytosol	30.02	27.46
AT4G33200.4	Thale cress	cytosol	33.45	24.95
AT1G17580.1	Thale cress	cytosol	33.27	24.87
AT4G28710.1	Thale cress	cytosol	32.48	24.34
AT1G04160.1	Thale cress	cytosol	32.13	24.33
AT1G54560.1	Thale cress	cytosol	32.66	24.26
AT5G20490.2	Thale cress	cytosol	32.66	24.23
AT2G20290.1	Thale cress	endoplasmic reticulum	31.69	24.11
AT5G43900.3	Thale cress	cytosol	32.83	23.83
AT1G08730.1	Thale cress	endoplasmic reticulum	32.13	23.73
AT2G31900.2	Thale cress	cytosol	32.13	23.44
AT1G04600.1	Thale cress	cytosol	32.75	21.5
AT2G33240.1	Thale cress	cytosol	32.04	20.57
AT5G20470.1	Thale cress	endoplasmic reticulum	3.35	6.83

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.2	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	EntrezGene:828845	UniProt:A0A1P8B4A4	ProteinID:ANM66412.1	ProteinID:ANM66413.1	ArrayExpress:AT4G27370
EnsemblPlantsGene:AT4G27370	RefSeq:AT4G27370	TAIR:AT4G27370	RefSeq:AT4G27370-TAIR-G	EnsemblPlants:AT4G27370.2	Unigene:At.54526
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016459	GO:GO:0016787	GO:GO:0051015	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR004009
InterPro:IPR008989	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo8	InterPro:Myosin_N
InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom	RefSeq:NP_001328308.1	RefSeq:NP_001328309.1	InterPro:P-loop_NTPase	PFAM:PF00063
PFAM:PF00612	PRINTS:PR00193	PFscan:PS50096	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140
PANTHER:PTHR13140:SF702	SMART:SM00015	SMART:SM00242	SUPFAM:SSF52540	UniParc:UPI000849167C	Symbol:VIIIB
SEG:seg	:	:	:	:	:

Description

VIIIBP-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G27370]

Coordinates

chr4:-:13694689..13701103

Molecular Weight (calculated)

130020.0 Da

IEP (calculated)

8.388

GRAVY (calculated)

-0.486

Length

1136 amino acids

Sequence
(BLAST)

0001: MMKSSVKEIL ESLRLLDSSE RSSSLPSPST FRAPMPLIRQ SLPAKFRNAI SLESKTIEKE DKDWSTEQIT QSAEKEKTGN EVVKISTAQM SRAKNSHDPE
0101: WINSAEYFVR EKLCVWCRVA ANGQWHLGKI HSTSSSDDVC VMLSANDDVV KVAMEEIFPA NPEILEGVED LTQLSYLNEP SLLYNLRVRY SQDLIYSKAG
0201: PVLIAVNPFK NVQIYGEEFL SAYQKNALDA PHVYAVADAA YDDMMREEKN QSIIISGESG AGKTETAKYA MQYLEALGGG SFGVENEILK TNCILEAFGN
0301: AKTSRNDNSS RFGKLMEIHF SAKGKICGAK LETFLLEKSR VAQLCNGERC YHIFYQLCAG ASPILKERLK IKAASEYNYL NQSNCLTIDR TDDAQKFHKL
0401: MEAFNIVQIP QEYQERTFAL LAAVLWLGNV SFEVIDNENH VEVVADEAVT NVAMLMGCNS KKLMVVLSTC KLQAGRDCIA KRLTLRQATD MRDSLAKIIY
0501: ASLFNWLVEQ INISLEVGNS RTGRSISILD IYGFESFKDN SFEQFCINYA NERLQQHFNR HLFKLEQEEY EGDGIDWTKV EFIDNQECLN LIEKKPIGLV
0601: SLLNEESNFP KATDTTFANK LKQHLNANSC FKGERGRGFR IKHYAGEVLY NTNGFLEKNR DPLHVDLIQL LSLCKCQLLN LFSTKMHHDF LKPATFSDSM
0701: NQSVIAKFKG QLFKLMNKLE DTTPHFIRCI KPNSNQLPGL YEENHVLQQL RCCGVLEIVR ISRSGYPTRL THQELAVRYG CLLLDTRISQ DPLSTSKAIL
0801: KQCNLPPEMY QVGYTKIYLR TGVISVLEER KKYVLRGILG LQKQFRGYQT REYFHNMRNA AVILQSYIRG ENARRNYIVV GESAIVSTAI TKELDAAIHL
0901: QYMVRKWLAR KLLNSTQQKN KPRNEKKKTR RKSTKRVSED KELLSEQFEV QPCVLADLQS RVLKVEAAIM QKEDENTALQ EELQRFEERW LENETRMKSM
1001: EDTWQKHMSS MQMSLAAACK VLAPDKTASH GTDSEDTMSF GTPTKELKGS LSDVNNLSTE FDQRSVIIHE DPKSLVEVKS DSISNRKQHA EELRRLKSRF
1101: EKWKKDYKTR LRETKARVRL NGDEGRHRNW WCKKSY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.