Factsheet for AT5G20490.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006561.1-P	Field mustard	cytosol	95.49	95.12
CDY66597	Canola	cytosol	94.32	94.88
Bra020105.1-P	Field mustard	cytosol	94.45	94.7
CDX70927	Canola	cytosol	95.62	94.09
CDY45087	Canola	cytosol	94.58	93.48
CDY51846	Canola	cytosol	95.43	92.41
KRH02661	Soybean	cytosol	83.61	83.66
KRH19248	Soybean	cytosol	83.08	83.14
VIT_11s0016g01710.t01	Wine grape	cytosol	81.25	81.9
Solyc07g041150.2.1	Tomato	nucleus	81.06	81.16
PGSC0003DMT400053991	Potato	cytosol	80.86	80.97
GSMUA_Achr8P26250_001	Banana	cytosol	78.38	78.38
EES03165	Sorghum	cytosol	77.47	77.57
Zm00001d044303_P003	Maize	plasma membrane	77.47	77.57
GSMUA_Achr5P09720_001	Banana	cytosol	78.58	76.97
HORVU3Hr1G050290.1	Barley	cytosol	76.62	76.72
TraesCS3B01G239700.1	Wheat	cytosol, golgi	76.62	76.72
TraesCS3A01G209500.1	Wheat	cytosol	76.29	76.64
Os03t0686300-00	Rice	plasma membrane	77.2	76.41
TraesCS3D01G212400.3	Wheat	cytosol	76.29	76.39
Os01t0713900-01	Rice	cytosol	18.03	74.19
GSMUA_AchrUn_...	Banana	cytosol	42.65	73.29
Os05t0537200-01	Rice	cytosol, plasma membrane	17.7	72.85
AT1G54560.1	Thale cress	cytosol	72.7	72.79
AT1G17580.1	Thale cress	cytosol	71.78	72.3
AT1G08730.1	Thale cress	endoplasmic reticulum	72.31	71.98
Zm00001d038844_P001	Maize	cytosol	28.54	69.37
AT1G04160.1	Thale cress	cytosol	60.88	62.13
AT2G31900.2	Thale cress	cytosol	62.18	61.14
AT4G28710.1	Thale cress	cytosol	60.16	60.75
AT5G43900.3	Thale cress	cytosol	61.99	60.64
AT2G20290.1	Thale cress	endoplasmic reticulum	56.43	57.87
AT3G58160.1	Thale cress	cytosol	44.61	54.99
AT4G33200.4	Thale cress	cytosol	53.89	54.17
Os05t0537300-01	Rice	cytosol, mitochondrion, peroxisome	12.08	51.53
AT1G04600.1	Thale cress	cytosol	57.87	51.21
AT2G33240.1	Thale cress	cytosol	56.7	49.04
AT5G20470.1	Thale cress	endoplasmic reticulum	15.68	43.17
TraesCS1B01G375000.1	Wheat	cytosol	59.11	42.25
TraesCS1D01G363400.1	Wheat	cytosol	59.18	42.16
HORVU1Hr1G080240.9	Barley	cytosol	59.11	42.15
TraesCS1A01G358500.1	Wheat	cytosol	56.7	41.67
OQU78360	Sorghum	cytosol	56.43	40.19
TraesCS3A01G248800.7	Wheat	cytosol	62.25	39.86
TraesCS3B01G277500.1	Wheat	cytosol	62.05	39.78
TraesCS3D01G248700.2	Wheat	cytosol	61.92	39.75
OQU87414	Sorghum	cytosol	61.59	39.51
Zm00001d011713_P003	Maize	endoplasmic reticulum	58.26	37.72
Zm00001d043667_P003	Maize	endoplasmic reticulum	44.74	34.27
AT1G50360.1	Thale cress	cytosol	25.8	34.26
AT3G19960.2	Thale cress	cytosol, plastid	25.34	32.99
AT4G27370.2	Thale cress	cytosol	24.23	32.66
Zm00001d038845_P002	Maize	nucleus	29.52	31.97
AT5G54280.2	Thale cress	cytosol	25.15	31.56
HORVU3Hr1G067400.2	Barley	cytosol	36.45	29.73

Protein Annotations

Gene3D:1.10.10.820	Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	MapMan:20.2.4.1	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	EntrezGene:832171	ProteinID:AED92852.2	EMBL:AF296833	EMBL:AK228703	ArrayExpress:AT5G20490
EnsemblPlantsGene:AT5G20490	RefSeq:AT5G20490	TAIR:AT5G20490	RefSeq:AT5G20490-TAIR-G	EnsemblPlants:AT5G20490.2	TAIR:AT5G20490.2
Unigene:At.43864	ncoils:Coil	InterPro:Dilute_dom	UniProt:F4K5J1	GO:GO:0000003	GO:GO:0000166
GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005856	GO:GO:0007015	GO:GO:0007018	GO:GO:0007275	GO:GO:0008017
GO:GO:0008150	GO:GO:0009506	GO:GO:0009653	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987
GO:GO:0010090	GO:GO:0010091	GO:GO:0016043	GO:GO:0016049	GO:GO:0016459	GO:GO:0016787
GO:GO:0030048	GO:GO:0030133	GO:GO:0030154	GO:GO:0035619	GO:GO:0040007	GO:GO:0048467
GO:GO:0048767	GO:GO:0048768	GO:GO:0051645	GO:GO:0051646	GO:GO:0060151	GO:GO:0090436
EMBL:HQ427882	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR002710	InterPro:IPR004009	InterPro:IPR036961
InterPro:IQ_motif_EF-hand-BS	EMBL:JN229265	InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo11	InterPro:MyosinXI_CBD	InterPro:Myosin_N
InterPro:Myosin_head_motor_dom	RefSeq:NP_001318612.1	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PFAM:PF01843
PFAM:PF02736	PO:PO:0000005	PO:PO:0000293	PO:PO:0007131	PO:PO:0009001	PO:PO:0009005
PO:PO:0009025	PO:PO:0009046	PO:PO:0009047	PRINTS:PR00193	PFscan:PS50096	PFscan:PS51126
PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF510	SMART:SM00015	SMART:SM00242
SMART:SM01132	SUPFAM:SSF52540	UniParc:UPI0001F5F20B	Symbol:XIK	SEG:seg	:

Description

XI-KMyosin-17 [Source:UniProtKB/Swiss-Prot;Acc:F4K5J1]

Coordinates

chr5:-:6926516..6937830

Molecular Weight (calculated)

173387.0 Da

IEP (calculated)

8.431

GRAVY (calculated)

-0.390

Length

1531 amino acids

Sequence
(BLAST)

0001: MVGPVNIIVG SHVWIEDPGA AWIDGEVVKI NGEEVHAHTT NGKTVVANIA NVFPKDTEAP PGGVDDMTKL SYLHEPGVLN NLAMRYELNE IYTYTGNILI
0101: AVNPFQRLPH LYDTHMMEQY KGAGFGELSP HVFAIAEVAY RAMINEGKSN SILVSGESGA GKTETTKMLM RYLAYLGGRS GVEGRTVEQQ VLESNPVLEA
0201: FGNAKTLRNN NSSRFGKFVE LQFDNCGRIS GAAVRTYLLE RSRVCQISDP ERNYHCFYLL CAAPPEEREK FKLGDPKLFH YLNQSKCYKL DGVDDTEEYL
0301: ATRRAMDIVG ISEEEQDAIF RVVAAILHLG NVNFAKGKEI DSSVLKDEKS RYHLDVCAEL LRCDAKKMED ALIKRVMVTP EEVITRTLDP DSATGSRDAL
0401: AKTIYSRLFD WLVDKINNSI GQDPNSKTII GVLDIYGFES FKINSFEQFC INFTNEKLQQ HFNQHVFKME QEDYTKEEIN WSYIEFVDNK DVLELIEKKP
0501: GGVIALLDEA CMFPKSTHET FAQKLYQTFK NYKRFTKPKL SRTSFAISHY AGEVTYQADL FLDKNKDYVV AEHQDLLIAS SDTFVAGLFP RLPEETSSKT
0601: KFSSIGSRFK LQLQSLMETL SSTEPHYIRC VKPNNVLKPA IFENVNVIQQ LRCGGVLEAI RISCAGYPTK RTFYEFLNRF GVLAPEVLEG NYDDKVACKM
0701: LLDKIGLKGY ELGKTKVFLR AGQMAELDAR RAEVLGNAAR RIQRQSRTFI ACKEFRALRG AAIVLQSNCR GKLACNLYEE MRRQAAAVKI QKIFRRHIAR
0801: ESYLRIRHST ITVQTALRGM VARNEFRFRK QMKAATIIQA RLRSHLTHSY YKQLQKAALS TQCGWRSRVA RKELRTLKMA ARDTGALREA KDKLEKRVEE
0901: LTWRLQLEKR QRTELEEAKT QEYAKQQEAL ETMRLQVEEA NAAVIREREA ARKAIEEAPP VIKETPVLVE DTEKINSLTS EVEALKASLQ AERQAAENLR
1001: KAFSEAEARN SELATELENA TRKADQLHES VQRLEEKLSN SESEIQVLRQ QALAISPTSR TMATRSKTML LPRTPENGNY LNGGTKTTPD MTLAVREPES
1101: EEKPQKHLNE KQQENQDLLV KCISQNLGYN GDKPVAACVI YKCLLHWRSF EVERTSVFDR IIQTIATAIE VPDNNEVLAY WLSNSATLLL LLQRTLKATG
1201: AASLTPQRRR TTSASLFGRM SQGLRGSPQS AGLSFLNRQG LTKLDDLRQV EAKYPALLFK QQLTAFLEKI YGMIRDNLKK EISPLLGLCI QAPRTSRASL
1301: VKGRAQANAV AQQALIAHWQ SIRKSLNSYL NLMKANNAPP FLVRKVFTQI FSFINVQLFN SLLLRRECCS FSNGEYVKAG LAELEQWCIE ATDEYAGSAW
1401: DELRHIRQAV GFLVIHQKPK KTLDEITREL CPVLSIQQLY RISTMYWDDK YGTHSVSSDV IANMRVMMTE DSNNAVSSSF LLDDDSSIPF TVEDISKSMQ
1501: QVDVNDIEPP QLIRENSGFG FLLTRKEGST S

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.